Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq17 122 3e-22
seq44 100 8e-16
>seq17
Length=3070003
Score = 122 bits (134), Expect = 3e-22
Identities = 118/149 (79%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||| |||| ||||||||||| |||||||||||||| ||||||||||||||||| | | |
Sbjct 1869689 TGGCCGATGGTCATACGACTCGGAATAGCATGGGGGTTGATGATGATGTCGGGAGTAATT 1869748
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957
|| || |||||||| || | ||||| || | ||| || |||| | || || |||||
Sbjct 1869749 CCCTCTGCAGTGAATGGTAGATCCTCTT-GGCGATAGGTGATTCCCACGGTGCCTTTTTG 1869807
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAA 251986
||| ||||||||| ||||| |||||||
Sbjct 1869808 TCCATGACGAGAAGCAAACTTGTCACCAA 1869836
Score = 87.8 bits (96), Expect = 5e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547
|| || ||||||||||||||||||||||| |||||||| || |||||||||||||| |
Sbjct 1869338 CCATGAGAAATCATACAATCACGCTCCATCTCACCGAATCGCAGACCACCATCGCGCGAA 1869397
Query 251548 CTACCCTCGGCAGGCTGACGAGT 251570
| ||| || ||||||| || ||
Sbjct 1869398 CGACCTTCCACAGGCTGTCGCGT 1869420
>seq44
Length=563738
Score = 100 bits (110), Expect = 8e-16
Identities = 223/328 (68%), Gaps = 10/328 (3%)
Strand=Plus/Plus
Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTT-GATTAAACGACGCTGAATATAACCAGT 302612
|| |||| || |||| || |||| || ||| || || |||||||| ||||| || ||
Sbjct 14999 TCGTAACAGATGGTAATATCCTCCA-ACGCTTTGACCAAGCGACGCTGGATATAGCCGGT 15057
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| || || || || |||||||| | ||| |||||||| |||| |||||||||||
Sbjct 15058 CTCGGCAGTCTTGACTGCAGTATCAATCAAACCTTCACGACCAGCCATGGCATGGAAGAA 15117
Query 302673 TAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730
| || | | ||| | ||| | | | | ||| |||| || || ||||| |||
Sbjct 15118 GAATTCGTGTGCAGTC--AACCCACGCAAATATGAGTTCTCTACAAACCCACGACTCTCA 15175
Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790
|| | | |||| ||||||||| || ||||| | |||| | || | || ||
Sbjct 15176 GGAGTAAAGTCGTCCTTGGTAAAATGCGGCAGACTTCTGTGGCGGAACCCAAACGGAATT 15235
Query 302791 CGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAAT 302848
||||| || || || ||| || || | |||| | |||||| ||||| || ||||
Sbjct 15236 CGCTTGCCTTCCACCGACTGTTGCCCAACACACGCAGACATCTGGGAAATGTTGATAAAC 15295
Query 302849 CACTGCCCTTGGAGCCAGCATTTACCAT 302876
| ||||||||||||||| | |||||
Sbjct 15296 GA--ACCCTTGGAGCCAGCAATCACCAT 15321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816675974513
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |