Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq45 125 9e-23 seq17 104 3e-16 >seq45 Length=461343 Score = 125 bits (138), Expect = 9e-23 Identities = 184/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||||||||| || |||| |||||| || |||||||| || || | |||||| Sbjct 424758 TGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGCATAGGAACAATCCCGTTGCTA 424699 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGT-GCGCGGCAAAGCC 1630184 |||| ||||| || || | ||| | ||| | | |||| | |||| | ||||| || Sbjct 424698 ACGCCATTGGTACCGGCAATGTAAGAGCCCGTGCCGCGGATATTGTGGATATGCAAA-CC 424640 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || ||||| | || ||||| | ||| || |||||| ||||| || ||||| || Sbjct 424639 GATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTGAGTGTGTCATAAATGCCTTC 424580 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| || ||| ||||||| | || | || || || || |||| || | || ||| || Sbjct 424579 GATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGACATTTGTGGATTCGGCGTTCC 424520 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 || ||||| || || || Sbjct 424519 AGCATTGAATAGAGTCGG 424502 Score = 96.9 bits (106), Expect = 4e-14 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 || ||||| || || || || ||||||||||||||| | ||||| | |||||| || Sbjct 410358 GCTTTGGCATAATCACCGACTTTCCGCTCGAAAAAGTTCGATTTGCCTTGGAGCGAAATG 410417 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | || ||||| | | || |||||||| | || | || | | Sbjct 410418 TTCTCCATAAAGTCAAAGGGGTTCGTAGCATTATAGTGCTTCGGGTTACCCAACGCCACC 410477 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||| || || || ||||| || |||||||| |||||||| | || ||||||||||| Sbjct 410478 AGCAAACGATCCGCAACAAATTCAATGTACTGACACATGAGTCTTGCATTCATGCCGATC 410537 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 | || ||| |||| | || || ||| | || |||||| | || ||||| Sbjct 410538 AACGACACTGGCAAGGCATCCGACAAAAAGTTTTGCTCGATGCCAACAGCCTC 410590 Score = 95.1 bits (104), Expect = 1e-13 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 1628374 CCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCG 1628433 |||||||| || | ||| || ||||| | ||||| | | | ||||||||| || Sbjct 424986 CCGTAGCAATCAGCTAAGCCTGGAGCCTCAGCAGGACACATCAAAGTCCAGTCGCCGCCC 424927 Query 1628434 GTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCC 1628493 | | | || |||||||| | ||| | |||||| ||| ||||| | |||||| || Sbjct 424926 TGCTCGACACGACGCATAAACAAGTCTGGCATCCACAATGCATAAAACAAGTCGCGAGCG 424867 Query 1628494 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGC 1628553 || || || || |||||||||||| |||||| || | |||| | ||| | ||| Sbjct 424866 CGAACTTCTTCTTTTCCGTGGTTCTTTCGGAGGTCAAGGAACTCGAACACGTCCGAATGC 424807 Query 1628554 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 || |||||||||||| ||||| || || |||||| ||| || Sbjct 424806 CAAGGCTCCAGGTAGATAGCAAAAGCACCAGGACGCTTGTTGCCACC 424760 >seq17 Length=3070003 Score = 104 bits (114), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 1254350 CAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTT 1254409 |||||| || ||| |||||||||||| ||||| |||||||| |||| ||| ||| | Sbjct 751696 CAGTTCACCAGGCAAGATCAGGCGCACAGCGGTTTGGATCTCACGCGAAGAGATGGTGCT 751755 Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469 |||||| || || || ||||| || | ||||| |||| ||||| | Sbjct 751756 CTTCTTGTTGTAGCTGGCGAGCTTCGATGCCTCAGTAGCAATGCGCTCGAAGATGTCTTG 751815 Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529 ||||||||||| | | | ||| | |||||| ||||| || ||||||||||||||| Sbjct 751816 CACAAACGAGTTGAGAATGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGCACCTG 751875 Query 1254530 CTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 ||| | ||| ||||||| | | ||||| Sbjct 751876 CTTCAACACACGGTAGATGTAGGTAGAGTA 751905 Score = 87.8 bits (96), Expect = 2e-11 Identities = 107/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 19040 CCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCC 19098 |||||| ||| |||||| ||||| || || || || |||||| |||| | || | Sbjct 1681473 CCAAGAACGACTCCATCGGTGGCACTGTCACCTGTGTTCTACGCAACATGCCTGTCGGGC 1681532 Query 19099 TCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCC 19158 | || ||||| ||||||||||| | ||||| | | || || |||||| || || | Sbjct 1681533 TTGGAGAGCCATGCTTTGACAAACTGGAGGCTATGTTGGCGCATGCCATGATGAGTATTC 1681592 Query 19159 CGGCCACCAAGGGATTCGAGATTGG 19183 | || |||||||||||||||||||| Sbjct 1681593 CAGCAACCAAGGGATTCGAGATTGG 1681617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107135178830533