Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq45 114 1e-20 seq27 114 1e-20 seq17 98.7 9e-16 >seq45 Length=461343 Score = 114 bits (126), Expect = 1e-20 Identities = 917/1470 (62%), Gaps = 66/1470 (4%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||||| ||||| || || ||||| | || || || | |||||||||||||||| | || Sbjct 425818 GTTTACCACCTGGAACTCGCCGGCAAGCACACGGCGCATGTAAATGTTGTTGGTGTACGG 425759 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 || || |||| ||| || || || ||| || | || || ||||| ||| | Sbjct 425758 TTCGAAGCATTCATTGAAACCAAGGATTTGACTGGTAGAGGCAGTGGGCATCGGCGCTAG 425699 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 ||| || || || || | || || | |||| |||| ||| | ||||| ||||| Sbjct 425698 CAACAGCGAGTTGCGCAGGCCATGCTGAGCGATTTTCGCCTTTAGCAAAGACCAATCCCA 425639 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 | ||| | ||| | |||||||||| |||||||| || || || ||| || || Sbjct 425638 AAGATCCGTCGGTGTCTTGTTCCACAAGTCGTACTGCAAGATACCTTGGGATGCTGGGCT 425579 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTC-GTTGCTCGCCTCGAGCG 138799 |||| ||| | |||||| || |||| ||||| || | || || | | Sbjct 425578 CCCTTGGTAGGTTTCGTATGTGCCTTCGACTTGAGCCAATTCACAAGAGCG-TTCCAAAG 425520 Query 138800 CACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGT 138859 | ||| ||||| |||||| |||||| ||| || || ||||| || ||| Sbjct 425519 CCGCATGATAAATTGTTTCGAAGATCTGCAAATTCAGACGACGTGCCTCTTGACTATCGA 425460 Query 138860 ACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGC 138919 |||| || | ||| |||| || ||||||| ||||| || || | || | || | Sbjct 425459 ACGGATAGCCCATGATCATGAATGCATCGGCCAAGCCTTGAACACCGATGCCAATCGGAC 425400 Query 138920 GATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTT 138979 | ||||||| || || || | |||| || || ||||| | ||||||||| Sbjct 425399 GGTGGCGCATGTTAGAACGACGAGCCGACTCGACTGGGTAGTAGTTAATATCGATGATCC 425340 Query 138980 TGTTTAA-ATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT- 139037 || || ||| ||| || || || | || | | | | || || | ||| || Sbjct 425339 GATTCAAGTTTTTGCA-GATGACTTTCGCAGTTTCATGAAGTTTTTGGAAGTTGTAGGTC 425281 Query 139038 ------GCCCCCGTTGTCGTCGACG-ACGTCGACAAATTTGTTGACACAAATCGAGGCTA 139090 || || ||| | | || | | |||| ||| | |||||||| | Sbjct 425280 TTTTCAGCGCCTGTT-CCCTGGATGAATGTCGGCAA----------AGCGATCGAGGCCA 425232 Query 139091 TGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTAC 139150 |||||| || || |||||| ||| |||||||| | ||||| | || | ||| Sbjct 425231 AGTTGCAAACAGCGGTTTCGTCTGGGGAACTGTATTCCATGATTTCTGTGCAAAGATTGG 425172 Query 139151 TACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAA 139210 | ||||| || | |||| || ||||| ||| ||| || || ||||| | Sbjct 425171 ATGATTTGATGACCCCGATGTTTTTCTGGTTGCTCTTTTCGTTGGCGGCGTCCTTGTATA 425112 Query 139211 GCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG 139270 | ||| | || ||| || || | |||| || | || | | || || Sbjct 425111 GGATAAAAGGCCCGCCGGTCTCGATCTGTGCTTCGAGGAT--------AGCATACCACAG 425060 Query 139271 CTTGTAT---TTGA-CGCACGTAAAGTTCGTCGC-GC---TCGTACTTTTCGTAGAGTTC 139322 ||| | | || | || |||| || | | || ||||| | ||||| || | Sbjct 425059 CTTCTGTGCCTTCACCGTACGTTTTCCACGACCCTGCTTTTCGTAGCTCTCGTAAAGGGC 425000 Query 139323 GTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGA 139382 | |||| ||||||||| |||| | | || || |||||||||| | | Sbjct 424999 ATTGAATTCCTCACCGTAGCAATCAGCTAAGCCTGGAGCCTCAGCAGGACACATCAAAGT 424940 Query 139383 CCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAG 139442 ||| ||||| | || ||| || | ||| |||| || || |||||||| || | | Sbjct 424939 CCAGTCGCCGCCCTGCTCGACACGACGCATAAACAAGTCTGGCATCCACAATGCATAAAA 424880 Query 139443 CAAATCGCGCGC-----CTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGA 139495 ||| ||||| || |||||| | ||||| || | | |||| | || ||||| Sbjct 424879 CAAGTCGCGAGCGCGAACTTCTTCTTTTCCG------TGGTTC-TTTCGGAGGTCAAGGA 424827 Query 139496 AATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TT 139552 | || || ||||| | ||||| || ||||| ||||| || | || || || | Sbjct 424826 ACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCAAAAGCACCAGGACGCTTGT 424767 Query 139553 TGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGAC 139612 |||||||||||||||||| ||| ||| || || || || || | ||| || | | | Sbjct 424766 TGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGCATAGGAACAATCC 424707 Query 139613 CGCTCGCT-GTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATG 139667 || | ||| || ||||| || | | | | | | | ||| | |||| | || Sbjct 424706 CG-TTGCTAACGCCATTGGTACCGGCAATGTAAGAGCCCG-TGC---CGCGGATATTGTG 424652 Query 139668 TACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTC 139727 | || | |||||||| ||| | ||| || || | | ||| | ||| || Sbjct 424651 GATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTGAGTGTGTC 424592 Query 139728 GTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGG 139787 || || ||| ||| ||||||| |||| ||||| || || || || | ||| || Sbjct 424591 ATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGACATTTGTGG 424532 Query 139788 TAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACAT 139847 ||| || || || ||||| ||| || ||||||||| | || ||||| Sbjct 424531 ATTCGGCGTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGAACGCCTTTTCGGACAT 424472 Query 139848 CAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCG 139907 || | ||| || ||||||||||| | | || |||||||| || || | ||| || Sbjct 424471 CATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGATTCCCACTGCGACACG 424412 Query 139908 CATCAGCATATGTTGGATCCGTTCGGCCAC 139937 ||||||||||||||| |||||||| || Sbjct 424411 CATCAGCATATGTTGAGGACGTTCGGCAAC 424382 >seq27 Length=1447875 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| | || | || || || || ||||| || ||||| || || || ||| || | Sbjct 354331 GATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTC 354272 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||||||||| ||||| ||||| || ||||| ||||| Sbjct 354271 TGACACGATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCA 354212 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || ||||||||||| || || |||||||| ||| | | || || || || Sbjct 354211 ACAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGCGACTACAA 354152 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||| || | ||||||||| | || |||| || || Sbjct 354151 CATCCAGAAGGAAAGCACTTTGCACTTGGTGCTCCGTCTGCGTGGTGG 354104 Score = 102 bits (112), Expect = 7e-17 Identities = 117/153 (76%), Gaps = 7/153 (5%) Strand=Plus/Plus Query 24781 AAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGC 24840 ||||| ||| || ||||| ||||||||||| || || |||||||||||| | |||||||| Sbjct 257884 AAAACCAAA-ATACAAGATAAAGAAGGAATCCCACCGGATCAACAACGTCTTATCTTTGC 257942 Query 24841 CGGGAAACAGCTGGAGGA--TTCGAGAAACA-TGTCAGATTATAACATTCAAAAGGAATC 24897 || |||||||| ||||| ||| ||| || ||||| || || ||||||||||| Sbjct 257943 TGGTAAACAGCTAGAGGACGGTCG---TACATTGAGCGATTACAATATCCAAAAGGAATC 257999 Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||| | || | |||||||| || || Sbjct 258000 TACATTACATCTAGTACTTCGATTGCGAGGCGG 258032 >seq17 Length=3070003 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||| | || || | || || || || ||||| | ||||| ||| | | Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || || ||||||||||||||||| || || ||||| || ||| Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTATA 24881 |||||| | ||||||||||| ||||| || || || || |||| ||| || || | Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGA-CGGAAGAACA-CTCAGCGACTACA 1437757 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGA 24934 |||| || ||||| || || || || ||||| | || ||| |||||||| Sbjct 1437758 ACATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGTCTGC---GAGGCGGA 1437807 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||||||||||||||| || || ||||| || ||||||||| | ||||||||||| ||| Sbjct 1437436 AAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAACAACGTCTTATCTTTGCCGGAAAA 1437495 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || ||||| | | | || || || ||||| || ||||| || || || || Sbjct 1437496 CAACTTGAGGACGGACGTACCTTGAGTGACTACAACATCCAGAAGGAGTCTACTCTTCAT 1437555 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 |||| | ||| | || || || Sbjct 1437556 CTGGTTCTCCGACTCCGTGGTGG 1437578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897324437720