Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq17 105 5e-18 seq38 86.0 5e-12 >seq17 Length=3070003 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || ||| ||||||| |||||| || || || || || ||||| || || Sbjct 1437807 TCCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 1437748 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || ||||||||||| || ||| | || | | ||| || ||||| || Sbjct 1437747 GAGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| |||||||||||||| | || || ||| |||| | || |||||| ||| || Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || |||||||| || || || || || | ||||| Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGA 29630 || || |||| |||||| || || || || || ||||| || || | ||| ||| || Sbjct 1437566 CGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAA-GGTACGTCC 1437508 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || |||||||| || ||| | || | | ||| || ||||| ||||| |||||||| Sbjct 1437507 GTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTT 1437448 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||||| |||| | || |||||| || ||||| | ||| || Sbjct 1437447 GTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAGTAAT 1437388 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| || || || || || | ||||| Sbjct 1437387 GGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 >seq38 Length=944797 Score = 86.0 bits (94), Expect = 5e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAGA 29630 || |||||||| || | ||| ||| ||||| ||||| || || | ||||| | || Sbjct 91212 CGAAGCACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATG-TACGGCC 91154 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| || || ||| | ||||| | |||||| ||||| |||||||||||||| Sbjct 91153 ATCTTCCAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTT 91094 Query 29691 GTCTTG 29696 ||| || Sbjct 91093 GTCCTG 91088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218969951909