Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq17 136 4e-27
seq45 122 9e-23
seq27 113 4e-20
>seq17
Length=3070003
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| ||||| | ||| | || | ||||| ||||| || || || |||||||| |||||
Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||| || ||||||||||||||| || ||| |||| |||||||| || || |||||
Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
||||| |||||||| || || || | | ||| | ||| || | | ||| |||
Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACT 1437627
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| | ||| | |||||||| |||||||| || ||||| | |||||||
Sbjct 1437626 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCATA 1437579
>seq45
Length=461343
Score = 122 bits (134), Expect = 9e-23
Identities = 155/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561
|| || || | |||||| || | ||||| |||| || || || ||| | ||| | |||
Sbjct 410590 GAGGCTGTTGGCATCGAGCAAAACTTTTTGTCGGATGCCTTGCCAGTGTCGTTGATCGGC 410531
Query 50562 ATGAACGCA-GACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50620
||||| ||| ||| | ||||| |||||||||| |||||||| || | ||| || ||
Sbjct 410530 ATGAATGCAAGAC-TCATGTGTCAGTACATTGAATTTGTTGCGGATCGTTTGCTGGTGGC 410472
Query 50621 GCTGGGACAACCGAAATACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAACATAT 50679
| |||| | ||||| |||||||||| ||| ||||||||| |||||| | ||||| |
Sbjct 410471 GTTGGGTAACCCGAAGCACTATAATGCTACG-AACCCCTTTGACTTTATGGAGAACATTT 410413
Query 50680 CGTTGGAGGGCAAAACAAACTTTTTCGA 50707
|| | | |||||| | |||||||||||
Sbjct 410412 CGCTCCAAGGCAAATCGAACTTTTTCGA 410385
>seq27
Length=1447875
Score = 113 bits (124), Expect = 4e-20
Identities = 117/151 (77%), Gaps = 3/151 (2%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| ||||| || || | |||| ||| | ||||||||| ||||| || ||||||||||||
Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||| | ||| || || |||||||||||| |||| |||||||| ||||| || ||
Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913
Query 137305 ATGCCTTCTTTGTC-GGTAATTTTTTGTTTT 137334
|| |||||||| || ||| |||| |||||
Sbjct 257912 ATTCCTTCTTTATCTTGTA--TTTTGGTTTT 257884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543700766800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |