Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq17 136 4e-27 seq45 122 9e-23 seq27 113 4e-20 >seq17 Length=3070003 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||| | ||| | || | ||||| ||||| || || || |||||||| ||||| Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| || ||||||||||||||| || ||| |||| |||||||| || || ||||| Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||| |||||||| || || || | | ||| | ||| || | | ||| ||| Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACT 1437627 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | ||| | |||||||| |||||||| || ||||| | ||||||| Sbjct 1437626 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCATA 1437579 >seq45 Length=461343 Score = 122 bits (134), Expect = 9e-23 Identities = 155/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 || || || | |||||| || | ||||| |||| || || || ||| | ||| | ||| Sbjct 410590 GAGGCTGTTGGCATCGAGCAAAACTTTTTGTCGGATGCCTTGCCAGTGTCGTTGATCGGC 410531 Query 50562 ATGAACGCA-GACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50620 ||||| ||| ||| | ||||| |||||||||| |||||||| || | ||| || || Sbjct 410530 ATGAATGCAAGAC-TCATGTGTCAGTACATTGAATTTGTTGCGGATCGTTTGCTGGTGGC 410472 Query 50621 GCTGGGACAACCGAAATACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAACATAT 50679 | |||| | ||||| |||||||||| ||| ||||||||| |||||| | ||||| | Sbjct 410471 GTTGGGTAACCCGAAGCACTATAATGCTACG-AACCCCTTTGACTTTATGGAGAACATTT 410413 Query 50680 CGTTGGAGGGCAAAACAAACTTTTTCGA 50707 || | | |||||| | ||||||||||| Sbjct 410412 CGCTCCAAGGCAAATCGAACTTTTTCGA 410385 >seq27 Length=1447875 Score = 113 bits (124), Expect = 4e-20 Identities = 117/151 (77%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||| || || | |||| ||| | ||||||||| ||||| || |||||||||||| Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||| || || |||||||||||| |||| |||||||| ||||| || || Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913 Query 137305 ATGCCTTCTTTGTC-GGTAATTTTTTGTTTT 137334 || |||||||| || ||| |||| ||||| Sbjct 257912 ATTCCTTCTTTATCTTGTA--TTTTGGTTTT 257884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543700766800