Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq17 176 9e-39 seq27 132 9e-26 seq38 86.0 1e-11 >seq17 Length=3070003 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| || ||| || || | || |||||||| || ||||| || || || || Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || |||| |||||||| ||||||||||| |||||||| || | |||||| || ||||| Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || ||||| ||||| || || |||||||| ||||||||| || ||| ||| Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACT 1437627 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || |||||||| ||||| ||||| || || | ||||| Sbjct 1437626 TCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | || |||||||| || ||||| || || || ||| | | | ||| Sbjct 1437566 CGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGGTACGTCCG 1437507 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || ||||||||||| |||||||| || | |||||| || ||||| || || || || Sbjct 1437506 TCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTG 1437447 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| ||||| || || || ||||||||||||||| || || ||||||||||| || Sbjct 1437446 TCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAGTAATG 1437387 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 |||||||| ||||| ||||| || || | ||||| || Sbjct 1437386 GTCTTGCCAGTCAATGTCTTCACGAAAACTTGCATGAT 1437349 >seq27 Length=1447875 Score = 132 bits (146), Expect = 9e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || ||| || || ||||||| ||| ||| ||||| || || || || Sbjct 354103 ACCACCACGCAGACGGAGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCT 354162 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | | ||| ||||| || || || ||||||||||| | || |||||||| ||||| Sbjct 354163 CAAAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGG 354222 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| || || |||||||| || |||||||| ||||| ||| | ||| || Sbjct 354223 AATACCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCAC 354282 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || |||||||| || |||| ||||| || || | ||||| Sbjct 354283 CTCAAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330 Score = 116 bits (128), Expect = 7e-21 Identities = 174/254 (69%), Gaps = 26/254 (10%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||| ||| || || |||| || | |||||||| || || ||||| ||||| Sbjct 258033 ACCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCT 257974 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | |||||| ||||| ||||| ||||||||||| || | ||||||||| || || Sbjct 257973 CAATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGG 257914 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTA--------------------------CA 82736 |||||||| |||||||| || || | ||| | || Sbjct 257913 GATTCCTTCTTTATCTTGTATTTTGGTTTTCACTGCCGGTAAGTTCCTCGTTTCTTACCA 257854 Query 82737 TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTT 82796 |||||||| ||||| | ||| ||||||||||| |||||||| || || | |||||| Sbjct 257853 TTTTCAATGGTATCGCTGCTTTCCACTTCCAAAGTGATCGTCTTCCCGGTGAGCGTCTTA 257794 Query 82797 ACAAATATCTGCAT 82810 ||||| | ||||| Sbjct 257793 ACAAACACTTGCAT 257780 >seq38 Length=944797 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||||| ||| ||| || || || || || ||| | | | || Sbjct 91212 CGAAGCACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCA 91153 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| ||||| ||||| ||||| || | | ||| || || ||||| || || || || Sbjct 91152 TCTTCCAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTG 91093 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||| ||| | || || || ||||| || | | ||| || |||| || ||| Sbjct 91092 TCCTGAACCTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATC 91033 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| |||| ||||| | ||| || ||||| Sbjct 91032 GTCTTGCCAGTCAGTGTCTTGATAAAGATTTGCAT 90998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826583596611