Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq45 120 7e-22 seq17 84.2 5e-11 >seq45 Length=461343 Score = 120 bits (132), Expect = 7e-22 Identities = 352/535 (66%), Gaps = 13/535 (2%) Strand=Plus/Plus Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACT---AATGGAGGACAATTGGCTTCTTGC 110525 ||||| |||| || ||||| || || ||||| ||| | ||| || ||||||| Sbjct 424493 CATGCATCTCCGACTCTATTCAATGCTGGAACGCCGAATCCA---CAAATGTCTTCTTG- 424548 Query 110526 TTTCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 |||||| | || || || || ||||| || ||||| |||||||| | || ||| Sbjct 424549 TTTCTTGGTCGGGATGAAGGACGATTCCATCGAAGGCATTTATGACACACTCAAATCTTG 424608 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAA 110644 ||| | || || |||| | | || ||||| ||| | || | || |||| ||| | Sbjct 424609 TGCGATGATCTCGAAAACCGCCGGTGGAATCGGTTTGCATATCCACAATATCCGCGGCAC 424668 Query 110645 AGGAGCAAATATCGCAACAGCGAAGGGTGCTT-CAACTGGACTTGTTCCAATGTTAAGAG 110703 || | | || || | || || | | |||| ||| ||||||| ||| | | | Sbjct 424669 GGGCTCTTACATTGCCGGTACCAATGGCGTTAGCAACGGGA-TTGTTCCTATGCTCCGTG 424727 Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTG 110760 | || ||| |||||||| || || |||||||||| || | | ||| | |||| Sbjct 424728 TGTTTAACAACACTGCACGCTACGTCGATCAAGGTGGCAACAAGCGTCCTGGTGCTTTTG 424787 Query 110761 CTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATC 110820 ||||||| || || ||||||||||| || | || || ||| | || || || || || | Sbjct 424788 CTATCTACCTGGAGCCTTGGCATTCGGACGTGTTCGAGTTCCTTGACCTCCGAAAGAACC 424847 Query 110821 AAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTAT 110880 | ||| |||||| | || || || || ||||||||| ||||||| |||| || | Sbjct 424848 ACGGAAAAGAAGAAGTTCGCGCTCGCGACTTGTTTTATGCATTGTGGATGCCAGACTTGT 424907 Query 110881 TCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTG 110940 | ||| ||||| | | ||| ||| || | ||||||||| | |||| | Sbjct 424908 TTATGCGTCGTGTCGAGCAGGGCGGCGACTGGACTTTGATGTGTCCTGCTGAGGCTCCAG 424967 Query 110941 GTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAA 110995 | || ||||| || || | || || | | ||||||||| | || ||||| Sbjct 424968 GCTTAGCTGATTGCTACGGTGAGGAATTCAATGCCCTTTACGAGAGCTACGAAAA 425022 Score = 111 bits (122), Expect = 4e-19 Identities = 292/436 (67%), Gaps = 16/436 (4%) Strand=Plus/Minus Query 131849 TTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG-TGCTTT 131907 |||||| | | || ||||| |||||| ||| ||||| || || || || || | |||| Sbjct 410812 TTTTCTGAACGTCTCGTAGCATTTGCTGCTGTGGAAGGGATCTTTTTCTCGGGATCCTTT 410753 Query 131908 CTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCA 131967 | | || || ||||| || ||||||||||||||||| ||||| || || || ||| | Sbjct 410752 GCCT-CGATTTTCTGGCTGAAAAAGCGTGGATTGATGCCGGGACTTTCCTTCTCTAATGA 410694 Query 131968 ATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAATT 132027 | | |||||| ||||||||| ||||| || || ||||| || | | ||| | || Sbjct 410693 ACTGATCTCGCGAGATGAAGGTTTGCACACCGACTTTGCCTGCTTGCTGTTTAGCCACTT 410634 Query 132028 TGCTGATAAACTTG---ATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGATAT 132084 | |||| || | | | | | || | | |||| | || || |||| || Sbjct 410633 ---GAAGAAACGTGCACACCCAGACACGGTCAACCGAATTATTACGGAGGCTGTTGGCAT 410577 Query 132085 CGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGC-TGACT 132143 |||| | | ||| | | || || ||||| ||||| || |||||||| |||| Sbjct 410576 CGAGCAAAACTTTTTGTCGGATGCCTTGCCAGTGTCGTTGATCGGCATGAATGCAAGACT 410517 Query 132144 CTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTAAT--TAACCAACTTGGATATTC 132201 | ||| ||||||||||||| ||||| |||||||| | | | |||| || | Sbjct 410516 C-ATGTGTCAGTACATTGAATTTGTTGCGGATCGTTTGCTGGTGGC---GTTGGGTAACC 410461 Query 132202 C-AAGATTTATAACACCCAAAACCCCTATACATGGATGGAGTCAATTTCGCTTGAAGGTA 132260 | ||| ||||| | ||||||| | | |||||| |||||||| |||| | Sbjct 410460 CGAAGCACTATAATGCTACGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAAGGCA 410401 Query 132261 AAACGAACTTCTTCGA 132276 || ||||||| ||||| Sbjct 410400 AATCGAACTTTTTCGA 410385 >seq17 Length=3070003 Score = 84.2 bits (92), Expect = 5e-11 Identities = 94/124 (76%), Gaps = 4/124 (3%) Strand=Plus/Plus Query 167616 GCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATT--TTTATCGAAC 167673 |||||||||| | ||||| ||| ||||| ||||| |||||||||| | ||| || Sbjct 2603111 GCAGCAATAGGTAGAGTGTTAAAGACATCAATGAATGTTTTCCAGATACGTATATTCAA- 2603169 Query 167674 CACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGAT 167733 ||| ||||||||||| |||||||| ||||| | | | || || ||||||||||| | Sbjct 2603170 -ACGCCGTTTGCATTCGTCGTAAAATCCATATACGCGGGTGACATTCGCACATTCGTGGT 2603228 Query 167734 TTCC 167737 | || Sbjct 2603229 TCCC 2603232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812054904089