Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq45 120 7e-22
seq17 84.2 5e-11
>seq45
Length=461343
Score = 120 bits (132), Expect = 7e-22
Identities = 352/535 (66%), Gaps = 13/535 (2%)
Strand=Plus/Plus
Query 110469 CATGCTACTCCTACCCTATTTAACGCAGGAACT---AATGGAGGACAATTGGCTTCTTGC 110525
||||| |||| || ||||| || || ||||| ||| | ||| || |||||||
Sbjct 424493 CATGCATCTCCGACTCTATTCAATGCTGGAACGCCGAATCCA---CAAATGTCTTCTTG- 424548
Query 110526 TTTCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584
|||||| | || || || || ||||| || ||||| |||||||| | || |||
Sbjct 424549 TTTCTTGGTCGGGATGAAGGACGATTCCATCGAAGGCATTTATGACACACTCAAATCTTG 424608
Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAA 110644
||| | || || |||| | | || ||||| ||| | || | || |||| ||| |
Sbjct 424609 TGCGATGATCTCGAAAACCGCCGGTGGAATCGGTTTGCATATCCACAATATCCGCGGCAC 424668
Query 110645 AGGAGCAAATATCGCAACAGCGAAGGGTGCTT-CAACTGGACTTGTTCCAATGTTAAGAG 110703
|| | | || || | || || | | |||| ||| ||||||| ||| | | |
Sbjct 424669 GGGCTCTTACATTGCCGGTACCAATGGCGTTAGCAACGGGA-TTGTTCCTATGCTCCGTG 424727
Query 110704 TCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTG 110760
| || ||| |||||||| || || |||||||||| || | | ||| | ||||
Sbjct 424728 TGTTTAACAACACTGCACGCTACGTCGATCAAGGTGGCAACAAGCGTCCTGGTGCTTTTG 424787
Query 110761 CTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATC 110820
||||||| || || ||||||||||| || | || || ||| | || || || || || |
Sbjct 424788 CTATCTACCTGGAGCCTTGGCATTCGGACGTGTTCGAGTTCCTTGACCTCCGAAAGAACC 424847
Query 110821 AAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTAT 110880
| ||| |||||| | || || || || ||||||||| ||||||| |||| || |
Sbjct 424848 ACGGAAAAGAAGAAGTTCGCGCTCGCGACTTGTTTTATGCATTGTGGATGCCAGACTTGT 424907
Query 110881 TCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTG 110940
| ||| ||||| | | ||| ||| || | ||||||||| | |||| |
Sbjct 424908 TTATGCGTCGTGTCGAGCAGGGCGGCGACTGGACTTTGATGTGTCCTGCTGAGGCTCCAG 424967
Query 110941 GTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAA 110995
| || ||||| || || | || || | | ||||||||| | || |||||
Sbjct 424968 GCTTAGCTGATTGCTACGGTGAGGAATTCAATGCCCTTTACGAGAGCTACGAAAA 425022
Score = 111 bits (122), Expect = 4e-19
Identities = 292/436 (67%), Gaps = 16/436 (4%)
Strand=Plus/Minus
Query 131849 TTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG-TGCTTT 131907
|||||| | | || ||||| |||||| ||| ||||| || || || || || | ||||
Sbjct 410812 TTTTCTGAACGTCTCGTAGCATTTGCTGCTGTGGAAGGGATCTTTTTCTCGGGATCCTTT 410753
Query 131908 CTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCA 131967
| | || || ||||| || ||||||||||||||||| ||||| || || || ||| |
Sbjct 410752 GCCT-CGATTTTCTGGCTGAAAAAGCGTGGATTGATGCCGGGACTTTCCTTCTCTAATGA 410694
Query 131968 ATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAATT 132027
| | |||||| ||||||||| ||||| || || ||||| || | | ||| | ||
Sbjct 410693 ACTGATCTCGCGAGATGAAGGTTTGCACACCGACTTTGCCTGCTTGCTGTTTAGCCACTT 410634
Query 132028 TGCTGATAAACTTG---ATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTTGATAT 132084
| |||| || | | | | | || | | |||| | || || |||| ||
Sbjct 410633 ---GAAGAAACGTGCACACCCAGACACGGTCAACCGAATTATTACGGAGGCTGTTGGCAT 410577
Query 132085 CGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGC-TGACT 132143
|||| | | ||| | | || || ||||| ||||| || |||||||| ||||
Sbjct 410576 CGAGCAAAACTTTTTGTCGGATGCCTTGCCAGTGTCGTTGATCGGCATGAATGCAAGACT 410517
Query 132144 CTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTAAT--TAACCAACTTGGATATTC 132201
| ||| ||||||||||||| ||||| |||||||| | | | |||| || |
Sbjct 410516 C-ATGTGTCAGTACATTGAATTTGTTGCGGATCGTTTGCTGGTGGC---GTTGGGTAACC 410461
Query 132202 C-AAGATTTATAACACCCAAAACCCCTATACATGGATGGAGTCAATTTCGCTTGAAGGTA 132260
| ||| ||||| | ||||||| | | |||||| |||||||| |||| |
Sbjct 410460 CGAAGCACTATAATGCTACGAACCCCTTTGACTTTATGGAGAACATTTCGCTCCAAGGCA 410401
Query 132261 AAACGAACTTCTTCGA 132276
|| ||||||| |||||
Sbjct 410400 AATCGAACTTTTTCGA 410385
>seq17
Length=3070003
Score = 84.2 bits (92), Expect = 5e-11
Identities = 94/124 (76%), Gaps = 4/124 (3%)
Strand=Plus/Plus
Query 167616 GCAGCAATAGACATAGTGTCAAAAACATCGATGAAACTTTTCCAGATT--TTTATCGAAC 167673
|||||||||| | ||||| ||| ||||| ||||| |||||||||| | ||| ||
Sbjct 2603111 GCAGCAATAGGTAGAGTGTTAAAGACATCAATGAATGTTTTCCAGATACGTATATTCAA- 2603169
Query 167674 CACGTCGTTTGCATTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGAT 167733
||| ||||||||||| |||||||| ||||| | | | || || ||||||||||| |
Sbjct 2603170 -ACGCCGTTTGCATTCGTCGTAAAATCCATATACGCGGGTGACATTCGCACATTCGTGGT 2603228
Query 167734 TTCC 167737
| ||
Sbjct 2603229 TCCC 2603232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812054904089
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |