Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq45 127 3e-23 seq17 109 8e-18 >seq45 Length=461343 Score = 127 bits (140), Expect = 3e-23 Identities = 185/261 (71%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || || || ||||| || |||||| || || | || || || || || | | Sbjct 424502 CCGACTCTATTCAATGCTGGAACGCCGAATCCACAAATGTCTTCTTGTTTCTTGGTCGGG 424561 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| |||||| ||||| ||||| |||||||| ||||| || ||| | ||||| Sbjct 424562 ATGAAGGACGATTCCATCGAAGGCATTTATGACACACTCAAATCTTGTGCGATGATCTCG 424621 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCA----CACAAGGTGCGCGCCGCGGGCGCCTA 260100 || | ||||| || |||||||| ||| ||||| | |||| | ||||| | || Sbjct 424622 AAAACCGCCGGTGGAATCGGTTT----GCATATCCACAATATCCGCGGCACGGGCTCTTA 424677 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || || ||||| ||| |||||| |||| || ||||| || || |||||| | Sbjct 424678 CATTGCCGGTACCAATGGCGTTAGCAACGGGATTGTTCCTATGCTCCGTGTGTTTAACAA 424737 Query 260161 CACGGCGCGCTACGTCGACCA 260181 ||| || ||||||||||| || Sbjct 424738 CACTGCACGCTACGTCGATCA 424758 >seq17 Length=3070003 Score = 109 bits (120), Expect = 8e-18 Identities = 164/230 (71%), Gaps = 10/230 (4%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| ||| |||||| ||| | ||||||||||||||| || | | ||| Sbjct 751905 TACTCTACCTACATCTACCGTGTGTTGAAGCAGGTGCACCCCGACACTGGT-----ATC- 751852 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||||| ||||| | || | ||||||||||| | ||||| |||| ||||| | Sbjct 751851 TCGAACAAGGCCATGGCCATTCTCAACTCGTTTGTGCAAGACATCTTCGAGCGCATTGCT 751792 Query 725019 ACCGAGGCCGGTCGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGA 725076 || ||||| ||| || || ||| ||||||| | ||| ||| |||| |||| Sbjct 751791 ACTGAGGCA--TCGAAGCTCGCCAGCTACAACAAGAAGAGCACCATCTCTTCGCGTGAGA 751734 Query 725077 TCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCC 725126 |||| ||||| |||||||||||| ||| || |||||| | | ||||||| Sbjct 751733 TCCAAACCGCTGTGCGCCTGATCTTGCCTGGTGAACTGTCGAAGCACGCC 751684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177806473859938