Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq27 109 6e-19 seq17 107 2e-18 seq45 86.0 6e-12 >seq27 Length=1447875 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| | ||| |||||| || ||||||||||||| | || || Sbjct 354113 AGACGGAGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGA 354172 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || ||||| ||||| ||||| ||||| || || || ||||| Sbjct 354173 CCATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCC 354232 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || ||| ||||| || | ||||| || |||||||| || || ||| Sbjct 354233 TTGTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTA 354292 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || | || || ||||| | |||||| Sbjct 354293 ATCGTCTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| | ||| | || || |||| || ||||||||||| || ||||| |||| Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| || |||||||| || ||||| || | ||| || ||||| || || Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 || |||||||| ||||| ||||| Sbjct 257912 ATTCCTTCTTTATCTTGTATTTT 257890 >seq17 Length=3070003 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | |||||| | || || || || || || ||||| || ||||||||||| | Sbjct 1437578 CCACCACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTC 1437519 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || || ||||| || ||||| || | ||| || || || || || Sbjct 1437518 AAGGTACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437459 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665 ||||| ||||| ||||| || || |||| || | |||| || || || || || || Sbjct 1437458 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGA-CGTTTTCAATCGTATCAGAAGACTCGAC 1437400 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||| || || || || || || ||||||| |||||| Sbjct 1437399 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| |||| || || | ||| || || || || || ||||| || ||||||||||||| Sbjct 1437807 TCCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 1437748 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || ||| ||||| ||||| || ||||| || | ||| || || || || || Sbjct 1437747 GAGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| ||||| ||||| || || || || || | || || || ||||| || Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||| || || || || || || ||||| | |||||| Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 >seq45 Length=461343 Score = 86.0 bits (94), Expect = 6e-12 Identities = 195/293 (67%), Gaps = 8/293 (3%) Strand=Plus/Plus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 ||||||| || ||||||||| || || ||||| |||||| |||||| |||| || Sbjct 424357 CTACTTGCTGCGTATCAACGGCAAAGTTGCCGAACGTCCTCAACATATGCTGATGCGTGT 424416 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 || ||||| || |||||||||||| | || |||| | || || ||| | |||||||| Sbjct 424417 CGCAGTGGGAATCCACGGCGAAGACGTAGAAAGCGCCATCGAGACATACAACATGATGTC 424476 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC----GC 7699 || ||| ||||| || || || || | || || || ||||| | Sbjct 424477 CGAAAAGGCGTTCACGCATGCATCTCCGACTCTATTCAATGCTGG----AACGCCGAATC 424532 Query 7700 CTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACA 7759 | ||| |||| || ||||| ||| | ||| || || |||||| |||||||| Sbjct 424533 CACAAATGTCTTCTTGTTTCTTGGTCGGGATGAAGGACGATTCCATCGAAGGCATTTATG 424592 Query 7760 ACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTG 7812 |||| || ||| || | || || ||| || ||| ||||| ||| || Sbjct 424593 ACACACTCAAATCTTGTGCGATGATCTCGAAAACCGCCGGTGGAATCGGTTTG 424645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398090443480