Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq27 105 6e-18 seq17 104 2e-17 seq38 91.5 1e-13 >seq27 Length=1447875 Score = 105 bits (116), Expect = 6e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | ||| | |||||| ||||| || ||||| |||||||| |||||| Sbjct 258032 CCGCCTCGCAATCGAAGTACTAGATGTAATGTAGATTCCTTTTGGATATTGTAATCGCTC 257973 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || |||| || ||||||||||| || | || ||||| ||||||||||| || Sbjct 257972 AATGTACGACCGTCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGTTGATCCGGTGGG 257913 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCA 27171 | || |||||||| || ||| |||||| Sbjct 257912 ATTCCTTCTTTATCTTGTATTTTGGTTTTCA 257882 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || || || || || || || |||||||||||| Sbjct 354104 CCACCACGCAGACGGAGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTC 354163 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| ||||| ||||| || | || | |||||||||||||| || Sbjct 354164 AAAGTACGACCATCTTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGA 354223 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || |||||| || | |||| | ||||| | || ||| || Sbjct 354224 ATACCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACC 354283 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || |||||||| || || || || | |||||| Sbjct 354284 TCAAGGGTAATCGTCTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330 >seq17 Length=3070003 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | |||| ||| | ||||| || || || || ||||||||||| Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747 Query 27081 A-TGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | |||||||||| ||||| ||||| | || ||||| ||||| ||||| || Sbjct 1437746 AGTGTT-CTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||||| || |||||| || | |||| | || || | | |||||| Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| | ||| || | ||||| |||| || || || |||| ||||||| Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCATA 1437579 >seq38 Length=944797 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 27031 ACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCT 27090 |||| | ||||| || || || || ||||| || |||||||| |||| | || Sbjct 91214 ACCGAAGCACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGC 91155 Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 | ||||| || || || ||||| |||| | || || || ||||| || | |||||||| Sbjct 91154 CATCTTCCAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTT 91095 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || | |||| |||| || | ||||| ||| |||||| || || || | Sbjct 91094 TGTCCTGAACCTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGA 91035 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | | ||||| ||||| || || | |||||||||||| ||||| Sbjct 91034 TCGTCTTGCCAGTCAGTGTCTTGATAAAGATTTGCATGGCTGC 90992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934146234488