Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 158 1e-33 seq27 147 2e-30 seq38 132 5e-26 seq45 102 9e-17 >seq17 Length=3070003 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||| |||| |||||||| | || |||||||| |||||| | || ||||| || | Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | |||||||| || || ||||| ||||| |||||||| ||||| Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| || ||||| || || |||||||| || | | || || ||| ||||| || Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGC-GACTACAA 1437758 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| || ||||||||||| || | ||||| || || ||| Sbjct 1437759 CATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGTCTGCGAGGCGGA 1437807 Score = 154 bits (170), Expect = 2e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459 ||||| |||||| | || || ||||| | || |||||||| |||||| | || || ||| Sbjct 1437346 ACTATCATGCAAGTTTTCGTGAAGACATTGACTGGCAAGACCATTACTTTGGAAGTCGAG 1437405 Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519 || ||||| |||| ||| | ||||| || || || ||||| ||||| |||||||| Sbjct 1437406 TCTTCTGATACGATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATTCCTCCG 1437465 Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579 ||||| || ||||| || ||||| || || ||||| ||||| | |||||| | ||| Sbjct 1437466 GACCAACAACGTCTTATCTTTGCCGGAAAACAACTTGAGGACGGACGTACCTTGAGTGAC 1437525 Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || |||| ||||| || ||||||||||| || | || || || ||||| Sbjct 1437526 TACAACATCCAGAAGGAGTCTACTCTTCATCTGGTTCTCCGACTCCGTGGTGG 1437578 >seq27 Length=1447875 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||| | || |||||||| || || || ||||| ||||| |||||||| || || | Sbjct 354330 ATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTCT 354271 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| || || ||||||||||| || |||||||| || || Sbjct 354270 GACACGATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAA 354211 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| | || |||||||||||||| || || |||| |||||| | ||| ||||| || Sbjct 354210 CAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGC-GACTACAA 354152 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||| |||| | || | || | ||||| || ||||| Sbjct 354151 CATCCAGAAGGAAAGCACTTTGCACTTGGTGCTCCGTCTGCGTGGTGG 354104 Score = 91.5 bits (100), Expect = 2e-13 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 |||| | ||||| || || || || ||||| || || || || || ||||| || |||| Sbjct 257882 TGAAAACCAAAATACAAGATAAAGAAGGAATCCCACCGGATCAACAACGTCTTATCTTTG 257941 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCC 27600 ||||||| || || ||||| | |||||| | ||| || || ||| ||||||||||||| Sbjct 257942 CTGGTAAACAGCTAGAGGACGGTCGTACATTGAGC-GATTACAATATCCAAAAGGAATCT 258000 Query 27601 ACTCTTCATCTAGT 27614 || | |||||||| Sbjct 258001 ACATTACATCTAGT 258014 >seq38 Length=944797 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||| ||||||| || || |||||||| || || || |||||||| || | Sbjct 90998 ATGCAAATCTTTATCAAGACACTGACTGGCAAGACGATCACGCTGGAGGTTGAATCCAGC 91057 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||||| | || |||||||||| ||||| |||||||| |||||| Sbjct 91058 GACACGATCGATGTAGTGAAGTCCAAGGTTCAGGACAAAGAGGGTATTCCTCCGGACCAG 91117 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | |||||||| || |||||||| || |||| ||||| | ||||| || Sbjct 91118 CAACGGTTGATTTTTGCCGGAAAGCAACTGGAAGATGGCCGTACATTGAGTGACTACAAC 91177 Query 27586 GTCCAAAAGGAATCCACT 27603 ||||||||||| |||| Sbjct 91178 ATCCAAAAGGAAAGCACT 91195 >seq45 Length=461343 Score = 102 bits (112), Expect = 9e-17 Identities = 185/268 (69%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 64628 TGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGT 64687 |||||| ||||| || || | || | || | |||| || || ||||| | |||| Sbjct 410895 TGTTCAATGCTATTGAAACGATCCCTGTAGTGAAACAAAAAGCAGAGTGGGCATTGCGGT 410836 Query 64688 GGATGAAT---CGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAG 64744 |||| ||| | | | |||||| | | ||||||| ||| ||||| |||||||| Sbjct 410835 GGATCAATGACCAACGCGCCTCGTTTTCTGAACGTCTCGTAGCATTTGCTGCTGTGGAAG 410776 Query 64745 GAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGC 64804 | || || || || || || || || ||||||||||| |||||||| || |||||| Sbjct 410775 GGATCTTTTTCTCGGGATCCTTTGCCTCGATTTTCTGGCTGAAAAAGCGTGGATTGATGC 410716 Query 64805 CAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTG 64864 | || || || || || || || |||||||| || || || || | ||| || |||| Sbjct 410715 CGGGACTTTCCTTCTCTAATGAACTGATCTCGCGAGATGAAGGTTTGCACACCGACTTTG 410656 Query 64865 C--GGTTACCCTGTTCAGCCACCTCAAG 64890 | | || ||||| |||||| | ||| Sbjct 410655 CCTGCTT--GCTGTTTAGCCACTTGAAG 410630 Score = 82.4 bits (90), Expect = 9e-11 Identities = 132/186 (71%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 80035 CGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATA 80094 |||| || ||||||||| ||| ||||| | |||||||||||||| || | |||||| Sbjct 426129 CGCGAGCGGAGATAGTACGAGCCGGTCTTCAAACCCTTCTTCCAGCCATAGAAATGCATA 426070 Query 80095 GAACTGAGCTTCGCAAGTGT-GGGGTTCTC-CATGAAGATGTTCAGAGACTGAGAC--TG 80150 ||| | | || ||| ||| || | ||| ||||| || |||||| | | || Sbjct 426069 GAAGTCAACTGACCAAATGTCGGTGCACTCAAATGAATAT----TGAGACTTTGGCTTTG 426014 Query 80151 ACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCA 80210 || || || || || || ||||| ||||| ||||| || |||||| | |||||||| Sbjct 426013 GCAAATAAATGCGCCGCGGTCTGCAGCCATATCAATGATCACCTTTTGAGAGATTTCCCA 425954 Query 80211 TACTGT 80216 ||| || Sbjct 425953 TACGGT 425948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310050684880