Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq17 158 1e-33
seq27 147 2e-30
seq38 132 5e-26
seq45 102 9e-17
>seq17
Length=3070003
Score = 158 bits (174), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||| |||| |||||||| | || |||||||| |||||| | || ||||| || |
Sbjct 1437580 ATGCAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCT 1437639
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | |||||||| || || ||||| ||||| |||||||| |||||
Sbjct 1437640 GATACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAA 1437699
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| ||||| || ||||| || || |||||||| || | | || || ||| ||||| ||
Sbjct 1437700 CAACGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGC-GACTACAA 1437758
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| || ||||||||||| || | ||||| || || |||
Sbjct 1437759 CATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGTCTGCGAGGCGGA 1437807
Score = 154 bits (170), Expect = 2e-32
Identities = 174/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459
||||| |||||| | || || ||||| | || |||||||| |||||| | || || |||
Sbjct 1437346 ACTATCATGCAAGTTTTCGTGAAGACATTGACTGGCAAGACCATTACTTTGGAAGTCGAG 1437405
Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519
|| ||||| |||| ||| | ||||| || || || ||||| ||||| ||||||||
Sbjct 1437406 TCTTCTGATACGATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATTCCTCCG 1437465
Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579
||||| || ||||| || ||||| || || ||||| ||||| | |||||| | |||
Sbjct 1437466 GACCAACAACGTCTTATCTTTGCCGGAAAACAACTTGAGGACGGACGTACCTTGAGTGAC 1437525
Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || |||| ||||| || ||||||||||| || | || || || |||||
Sbjct 1437526 TACAACATCCAGAAGGAGTCTACTCTTCATCTGGTTCTCCGACTCCGTGGTGG 1437578
>seq27
Length=1447875
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||| | || |||||||| || || || ||||| ||||| |||||||| || || |
Sbjct 354330 ATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTCT 354271
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || ||||||||||| || |||||||| || ||
Sbjct 354270 GACACGATCGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATCAA 354211
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| | || |||||||||||||| || || |||| |||||| | ||| ||||| ||
Sbjct 354210 CAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGC-GACTACAA 354152
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||| |||| | || | || | ||||| || |||||
Sbjct 354151 CATCCAGAAGGAAAGCACTTTGCACTTGGTGCTCCGTCTGCGTGGTGG 354104
Score = 91.5 bits (100), Expect = 2e-13
Identities = 102/134 (76%), Gaps = 2/134 (1%)
Strand=Plus/Plus
Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541
|||| | ||||| || || || || ||||| || || || || || ||||| || ||||
Sbjct 257882 TGAAAACCAAAATACAAGATAAAGAAGGAATCCCACCGGATCAACAACGTCTTATCTTTG 257941
Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCC 27600
||||||| || || ||||| | |||||| | ||| || || ||| |||||||||||||
Sbjct 257942 CTGGTAAACAGCTAGAGGACGGTCGTACATTGAGC-GATTACAATATCCAAAAGGAATCT 258000
Query 27601 ACTCTTCATCTAGT 27614
|| | ||||||||
Sbjct 258001 ACATTACATCTAGT 258014
>seq38
Length=944797
Score = 132 bits (146), Expect = 5e-26
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||| ||||||| || || |||||||| || || || |||||||| || |
Sbjct 90998 ATGCAAATCTTTATCAAGACACTGACTGGCAAGACGATCACGCTGGAGGTTGAATCCAGC 91057
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||||| | || |||||||||| ||||| |||||||| ||||||
Sbjct 91058 GACACGATCGATGTAGTGAAGTCCAAGGTTCAGGACAAAGAGGGTATTCCTCCGGACCAG 91117
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | |||||||| || |||||||| || |||| ||||| | ||||| ||
Sbjct 91118 CAACGGTTGATTTTTGCCGGAAAGCAACTGGAAGATGGCCGTACATTGAGTGACTACAAC 91177
Query 27586 GTCCAAAAGGAATCCACT 27603
||||||||||| ||||
Sbjct 91178 ATCCAAAAGGAAAGCACT 91195
>seq45
Length=461343
Score = 102 bits (112), Expect = 9e-17
Identities = 185/268 (69%), Gaps = 7/268 (3%)
Strand=Plus/Minus
Query 64628 TGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGT 64687
|||||| ||||| || || | || | || | |||| || || ||||| | ||||
Sbjct 410895 TGTTCAATGCTATTGAAACGATCCCTGTAGTGAAACAAAAAGCAGAGTGGGCATTGCGGT 410836
Query 64688 GGATGAAT---CGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAG 64744
|||| ||| | | | |||||| | | ||||||| ||| ||||| ||||||||
Sbjct 410835 GGATCAATGACCAACGCGCCTCGTTTTCTGAACGTCTCGTAGCATTTGCTGCTGTGGAAG 410776
Query 64745 GAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGC 64804
| || || || || || || || || ||||||||||| |||||||| || ||||||
Sbjct 410775 GGATCTTTTTCTCGGGATCCTTTGCCTCGATTTTCTGGCTGAAAAAGCGTGGATTGATGC 410716
Query 64805 CAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTG 64864
| || || || || || || || |||||||| || || || || | ||| || ||||
Sbjct 410715 CGGGACTTTCCTTCTCTAATGAACTGATCTCGCGAGATGAAGGTTTGCACACCGACTTTG 410656
Query 64865 C--GGTTACCCTGTTCAGCCACCTCAAG 64890
| | || ||||| |||||| | |||
Sbjct 410655 CCTGCTT--GCTGTTTAGCCACTTGAAG 410630
Score = 82.4 bits (90), Expect = 9e-11
Identities = 132/186 (71%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 80035 CGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATA 80094
|||| || ||||||||| ||| ||||| | |||||||||||||| || | ||||||
Sbjct 426129 CGCGAGCGGAGATAGTACGAGCCGGTCTTCAAACCCTTCTTCCAGCCATAGAAATGCATA 426070
Query 80095 GAACTGAGCTTCGCAAGTGT-GGGGTTCTC-CATGAAGATGTTCAGAGACTGAGAC--TG 80150
||| | | || ||| ||| || | ||| ||||| || |||||| | | ||
Sbjct 426069 GAAGTCAACTGACCAAATGTCGGTGCACTCAAATGAATAT----TGAGACTTTGGCTTTG 426014
Query 80151 ACAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCA 80210
|| || || || || || ||||| ||||| ||||| || |||||| | ||||||||
Sbjct 426013 GCAAATAAATGCGCCGCGGTCTGCAGCCATATCAATGATCACCTTTTGAGAGATTTCCCA 425954
Query 80211 TACTGT 80216
||| ||
Sbjct 425953 TACGGT 425948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310050684880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |