Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq17 109 3e-19 >seq17 Length=3070003 Score = 109 bits (120), Expect = 3e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||||| ||||| | ||||| ||| ||||| |||||| || ||||| || || Sbjct 1437806 CCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1437747 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||||| ||||||| |||||||| |||||||| || | ||| ||||||||||| || Sbjct 1437746 AGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGA 1437687 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||| |||||| |||||| Sbjct 1437686 ATGCCCTCTTTGTCTTGGATCTT 1437664 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| ||| ||||| |||||| || ||||| || || | || || |||| ||| Sbjct 1437560 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGGTACGTCCGTCCTCA 1437501 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 |||||||| |||||||| || | ||| ||||||||||| || | ||||| |||||| | Sbjct 1437500 AGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCTTGG 1437441 Query 34618 ATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| | ||| || || ||| ||||||| || || || || Sbjct 1437440 ATC-TTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAGTAATGGTCTT 1437382 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || ||||| |||| |||||| Sbjct 1437381 GCCAGTCAATGTCTTCACGAAAACTTGCATG 1437351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729412047417