Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq38 105 5e-18 seq27 87.8 1e-12 >seq38 Length=944797 Score = 105 bits (116), Expect = 5e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||| ||| |||| ||| ||||||||||| |||||||||||||| ||| |||| Sbjct 91091 GACAAAGAGGGTATTCCTCCGGACCAGCAACGGTTGATTTTTGCCGGAAAGCAACTGGAA 91150 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998 || | || | ||| || |||||||||||||| || ||||||||||| ||||| Sbjct 91151 GATGGCCGTACATTGAGTGACTACAACATCCAAAAGGAAAGCACTTTGCACTTGGT 91206 >seq27 Length=1447875 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||| | || || || || || || || || ||||| |||| || ||| | | Sbjct 354330 ATGCAAGTGTTCGTCAAGACCCTGACGGGTAAGACGATTACCCTTGAGGTGGAATCCTCT 354271 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | ||| ||||| ||| || ||||| |||||| |||| ||| | Sbjct 354270 GACACGATCGAAAAT--GTCAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCGGATC 354213 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | || || || || ||||| || || || |||| || | || | ||| ||| |||| Sbjct 354212 AACAGCGATTGATCTTTGCTGGTAAGCAGCTGGAAGATGGTCGTACTTTGAGCGACTACA 354153 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| || || ||||||||||| ||||| | ||| ||||||| || Sbjct 354152 ACATCCAGAAGGAAAGCACTTTGCACTTGGTGCTCCGTCTGCGTGGTGG 354104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862187483423