Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq27 161 2e-34
seq17 147 5e-30
seq38 111 4e-19
>seq27
Length=1447875
Score = 161 bits (178), Expect = 2e-34
Identities = 165/213 (77%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961
|| || | ||| | |||| || || |||||||| || || | ||| | | | |||||
Sbjct 354119 AGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAG-TACGACCATC 354177
Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|||||||||||| || || ||||| | || ||||| || ||||||| |||||||||||
Sbjct 354178 TTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTC 354237
Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
|||||||||| || || |||||||| ||||||||| ||| ||||| || || |||||
Sbjct 354238 CTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGT 354297
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| ||||| || ||||| || ||||| |||||
Sbjct 354298 CTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330
>seq17
Length=3070003
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| || | ||| || || |||||||| ||||| || |||||||| || || || ||
Sbjct 1437800 CGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTT 1437741
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
||||| ||||| || || || || || |||||||| ||||||||||| ||||||| ||
Sbjct 1437740 CTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCC 1437681
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| ||||| |||||||| || || |||||||| || ||||| |||||| || | |
Sbjct 1437680 TCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACTTCCAAA 1437621
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || | ||||| || || || |||||
Sbjct 1437620 GTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580
Score = 134 bits (148), Expect = 3e-26
Identities = 165/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951
||| |||| || || || |||||||| ||||| || |||||||| || || | |||||
Sbjct 1437573 ACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGG- 1437515
Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011
| | ||| || || || || || || || |||||||| ||||||||||| ||||||| |
Sbjct 1437514 TACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGC 1437455
Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071
| || ||||| |||||||| || |||||||| || || ||||| || || || |
Sbjct 1437454 CCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCA 1437395
Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || ||||| || || | ||||| || || || |||||
Sbjct 1437394 AAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352
>seq38
Length=944797
Score = 111 bits (122), Expect = 4e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961
|| || | ||| | |||| || ||||||||||| || || | ||| | | | |||||
Sbjct 91209 AGCACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATG-TACGGCCATC 91151
Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|||||| ||||| || || || || | ||||| ||||| ||||||| || || |||||
Sbjct 91150 TTCCAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTC 91091
Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
||| | ||| ||||| ||||| ||||| | ||||||||| || ||||||||
Sbjct 91090 CTGAACCTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGT 91031
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || || ||||| | ||| | |||||
Sbjct 91030 CTTGCCAGTCAGTGTCTTGATAAAGATTTGCAT 90998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151272269885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |