Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq27 161 2e-34 seq17 147 5e-30 seq38 111 4e-19 >seq27 Length=1447875 Score = 161 bits (178), Expect = 2e-34 Identities = 165/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || || | ||| | |||| || || |||||||| || || | ||| | | | ||||| Sbjct 354119 AGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAG-TACGACCATC 354177 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||||||||||| || || ||||| | || ||||| || ||||||| ||||||||||| Sbjct 354178 TTCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTC 354237 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||||||||| || || |||||||| ||||||||| ||| ||||| || || ||||| Sbjct 354238 CTGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGT 354297 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| || ||||| || ||||| ||||| Sbjct 354298 CTTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330 >seq17 Length=3070003 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || || | ||| || || |||||||| ||||| || |||||||| || || || || Sbjct 1437800 CGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTT 1437741 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 ||||| ||||| || || || || || |||||||| ||||||||||| ||||||| || Sbjct 1437740 CTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCC 1437681 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || ||||| |||||||| || || |||||||| || ||||| |||||| || | | Sbjct 1437680 TCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACTTCCAAA 1437621 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | ||||| || || || ||||| Sbjct 1437620 GTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Score = 134 bits (148), Expect = 3e-26 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 ||| |||| || || || |||||||| ||||| || |||||||| || || | ||||| Sbjct 1437573 ACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGG- 1437515 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | ||| || || || || || || || |||||||| ||||||||||| ||||||| | Sbjct 1437514 TACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGC 1437455 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 | || ||||| |||||||| || |||||||| || || ||||| || || || | Sbjct 1437454 CCTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCA 1437395 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || || | ||||| || || || ||||| Sbjct 1437394 AAGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 >seq38 Length=944797 Score = 111 bits (122), Expect = 4e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || || | ||| | |||| || ||||||||||| || || | ||| | | | ||||| Sbjct 91209 AGCACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATG-TACGGCCATC 91151 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||||| ||||| || || || || | ||||| ||||| ||||||| || || ||||| Sbjct 91150 TTCCAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTC 91091 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| | ||| ||||| ||||| ||||| | ||||||||| || |||||||| Sbjct 91090 CTGAACCTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGT 91031 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || ||||| | ||| | ||||| Sbjct 91030 CTTGCCAGTCAGTGTCTTGATAAAGATTTGCAT 90998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151272269885