Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq27 176 1e-38 seq17 143 6e-29 seq38 122 2e-22 >seq27 Length=1447875 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | |||| ||| || |||| ||||| ||| |||||| | |||||| Sbjct 354119 AGCACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCT 354178 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | ||| ||||| || || ||||||||||||||||| Sbjct 354179 TCCAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTCC 354238 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| |||||| ||||| |||| |||||| || | || |||||| Sbjct 354239 TGGATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGTC 354298 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||| || || | |||||||||||| Sbjct 354299 TTACCCGTCAGGGTCTTGACGAACACTTGCAT 354330 >seq17 Length=3070003 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || ||||| || || || |||| ||||| ||| | ||||| || ||| Sbjct 1437791 AGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGTGTTCTTCCGTCT 1437732 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || || |||||||| ||||||||||| || ||||| || || |||||| Sbjct 1437731 TCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCT 1437672 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||| || || || | ||| || || || || || ||| Sbjct 1437671 TGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAACTTCCAAAGTAATGGTC 1437612 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| |||||||| Sbjct 1437611 TTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| || || || || ||||| || || || |||| ||||| || ||| || Sbjct 1437573 ACGGAGTCGGAGAACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGGT 1437514 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || || || || || || |||||||| ||||||||||| || ||||| || Sbjct 1437513 ACGTCCGTCCTCAAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCC 1437454 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || |||||||||||||| ||| || ||| || || || || | || || || || Sbjct 1437453 CTCTTTGTCTTGGATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAA 1437394 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| ||||| || || | ||| |||||||| Sbjct 1437393 AGTAATGGTCTTGCCAGTCAATGTCTTCACGAAAACTTGCAT 1437352 >seq38 Length=944797 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | |||| ||| ||||||| ||||| || ||| || | |||||| Sbjct 91209 AGCACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCT 91150 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || || || | ||||| ||||| || |||||||| || ||||| Sbjct 91149 TCCAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCC 91090 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || | ||| |||||| | ||||| ||||| || ||| || || | |||||||||| Sbjct 91089 TGAACCTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGTC 91030 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || || || | |||||| Sbjct 91029 TTGCCAGTCAGTGTCTTGATAAAGATTTGCAT 90998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530451314006