Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq45 165 1e-35 >seq45 Length=461343 Score = 165 bits (182), Expect = 1e-35 Identities = 416/630 (66%), Gaps = 2/630 (0%) Strand=Plus/Minus Query 76565 GGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATC 76624 ||||||||||| | ||| || || | | || || || |||||| | || || ||| Sbjct 424953 GGACACATCAAAGTCCAGTCGCCGCCCTGCTCGACACGACGCATAAACAAGTCTGGCATC 424894 Query 76625 CATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGA 76684 || | ||| ||| | || || | | | |||||| ||||| |||||| || Sbjct 424893 CACAATGCATAAAACAAGTCGCGAGCGCGAACTTCTTCTTTTCCGTGGTTCTTTCGGAGG 424834 Query 76685 TCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGT 76744 || |||||||| | | || |||||||| || || || || || || | | |||| || Sbjct 424833 TCAAGGAACTCGAACACGTCCGAATGCCAAGGCTCCAGGTAGATAGCAAAAGCACCAGGA 424774 Query 76745 CGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGA 76804 || || || || || ||||| | || | |||||||| ||| | || | | ||| ||| Sbjct 424773 CGCTTGTTGCCACCTTGATCGACGTAGCGTGCAGTGTTGTTAAACACACGGAGCATAGGA 424714 Query 76805 ATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATG-CACGAATATT 76863 | ||| ||||| ||||| || || | ||| ||| || | || | || ||||| Sbjct 424713 ACAATCCCGTTGCTAACGCCATTGGTACCGGCAATGTAAGAGCC-CGTGCCGCGGATATT 424655 Query 76864 ACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGT 76923 ||| | || ||||| || || |||| ||||| | ||||| ||| | ||| Sbjct 424654 GTGGATATGCAAACCGATTCCACCGGCGGTTTTCGAGATCATCGCACAAGATTTGAGTGT 424595 Query 76924 GTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 76983 |||||| ||||| || || ||| ||| |||| | | ||||| ||||||||| Sbjct 424594 GTCATAAATGCCTTCGATGGAATCGTCCTTCATCCCGACCAAGAAACAAGAAGACATTTG 424535 Query 76984 ATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA 77043 ||| ||||| ||||| || | || ||||||||||| |||||| ||||| || Sbjct 424534 TGGATTCGGCGTTCCAGCATTGAATAGAGTCGGAGATGCATGCGTGAACGCCTTTTCGGA 424475 Query 77044 AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGAC 77103 | | |||||||| || || | ||||| || || ||||| || ||||| Sbjct 424474 CATCATGTTGTATGTCTCGATGGCGCTTTCTACGTCTTCGCCGTGGATTCCCACTGCGAC 424415 Query 77104 ACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGA 77163 |||||||| |||||| ||||| ||||| || || || || || |||||| || Sbjct 424414 ACGCATCAGCATATGTTGAGGACGTTCGGCAACTTTGCCGTTGATACGCAGCAAGTAGGA 424355 Query 77164 TTTTTCCAAAGTTTTAAAACCAAAATAGTT 77193 | || | || || || |||||| |||| Sbjct 424354 TCGCTCTAGTGTCTTGAAGCCAAAAAAGTT 424325 Score = 152 bits (168), Expect = 7e-32 Identities = 400/609 (66%), Gaps = 6/609 (1%) Strand=Plus/Plus Query 46610 TCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTA 46669 |||| || |||||| || || ||||| || || | |||||||||| || | Sbjct 410632 TCAAGTGGCTAAACAGCAAGCAGGCAAAGTCGGTGTGCAAACCTTCATCTCGCGAGATCA 410691 Query 46670 ATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCG 46729 ||| ||||| || | || || ||||| | |||||||||||| ||||| || || | | Sbjct 410692 GTTCATTAGAGAAGGAAAGTCCCGGCATCAATCCACGCTTTTTCAGCCAGAAAATCGAGG 410751 Query 46730 CGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGT 46789 | || ||||| || || || || ||||| ||||| || ||||| || || | || Sbjct 410752 CAAAGGATCCCGAGAAAAAGATCCCTTCCACAGCAGCAAATGCTACGAGACGTTCAGAAA 410811 Query 46790 AACTGGC---ATCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAG 46846 | ||| | | || ||||||| ||||| || || |||| || || || Sbjct 410812 ACGAGGCGCGTTGGTCATTGATCCACCGCAATGCCCACTCTGCTTTTTGTTTCACTACAG 410871 Query 46847 GCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTAT 46906 | || ||||| |||||||| || | || | | || || || | ||| |||| Sbjct 410872 GGATCGTTTCAATAGCATTGAACAAGAACTCTCGTTGCTCTGGCTCGCGGATATAGGTAT 410931 Query 46907 CTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAA 46966 | || || || || |||| || || ||||| ||||| || || || || || | Sbjct 410932 CGATCAATAGCGAGTAGGTTTCCGAGTGGATGTTCTCAATCATGATTTGGAAGCCATAGA 410991 Query 46967 AACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCA 47026 |||| | ||||||| | || || || | | |||||||| | | |||||| || | Sbjct 410992 AACAGCGCGCTTCAGCAGCTTGCACTTCGTTGCTGAATCGTTCCAAGAGATTCTCGTTAA 411051 Query 47027 CTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGG 47086 | || || || || || ||||| |||| ||||| | ||||| | | |||| | Sbjct 411052 CAATCCCGTCCGAGGCCGCGAAAAACGCCAGCACATGACTGATAAAGTGTCGCTCATTGT 411111 Query 47087 TAGTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 47143 ||| ||| || ||| |||| | ||| || || | || | |||||| || |||| Sbjct 411112 CGTTCAATTTGTTGTCCCAATCATGCAGATCCTTGGACAAGTCGATTTCTTCCGCAGTCC 411171 Query 47144 AGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAA 47203 |||| || || || || || || ||||| | ||| || ||| | ||| |||| ||||| | Sbjct 411172 AGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAAATCTCATGGTATCGGATGGGAAACA 411231 Query 47204 TAACAAATC 47212 ||||||| Sbjct 411232 GTACAAATC 411240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933963327680