Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq27 149 5e-31 seq38 123 2e-23 seq17 100 2e-16 >seq27 Length=1447875 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | ||||| ||||| ||||||||||| ||| | || | || || Sbjct 354121 CACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCTTC 354180 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || ||||||||||| ||||| ||||| | ||| | ||||||||| ||| Sbjct 354181 CAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTCCTG 354240 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || ||||| | |||||||||||| | ||||||||||| Sbjct 354241 GATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGTCTT 354300 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| ||||| | |||||| Sbjct 354301 ACCCGTCAGGGTCTTGACGAACACTTGCAT 354330 >seq38 Length=944797 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | ||||| ||||||||||||||||| || | | || | || || Sbjct 91207 CACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTC 91148 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||| ||||| |||||||| ||||| || ||||| || | ||| | ||| || || ||| Sbjct 91147 CAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTG 91088 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 | ||| ||||| | | || |||||| |||||| ||||||| ||| |||||||| Sbjct 91087 AACCTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGTCTT 91028 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| | |||||||||||| Sbjct 91027 GCCAGTCAGTGTCTTGATAAAGATTTGCATG 90997 >seq17 Length=3070003 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| ||| | | |||||| ||||| || |||||| ||||||||||| ||| Sbjct 1437807 TCCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 1437748 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 |||| | |||| || || || || ||||||||||| | ||| || || || | ||| Sbjct 1437747 GAGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | || || || || ||||| ||| | || | || || || | ||||| || Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||| ||||| || || | ||||| ||||||| |||||| Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 ||||| ||||| || |||||| ||||||||||| || | || | || |||| || Sbjct 1437560 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGGTA-CGTCCGTCCTC 1437502 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || ||||||||||| | ||| || || || | ||| | || || || || Sbjct 1437501 AAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCTTG 1437442 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || || || | || || || |||| ||||| ||||| Sbjct 1437441 GATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAGTAATGGTCTT 1437382 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT-GTGAA 44345 || || | ||||||||||| | ||||||||| ||||| Sbjct 1437381 GCCAGTCAATGTCTTCACGAAAACTTGCATGATAGTGAA 1437343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990185018233