Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08-
11] 49 sequences; 8,106,837 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq27 149 5e-31
seq38 123 2e-23
seq17 100 2e-16
>seq27
Length=1447875
Score = 149 bits (164), Expect = 5e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| | ||||| ||||| ||||||||||| ||| | || | || ||
Sbjct 354121 CACCAAGTGCAAAGTGCTTTCCTTCTGGATGTTGTAGTCGCTCAAAGTACGACCATCTTC 354180
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || ||||||||||| ||||| ||||| | ||| | ||||||||| |||
Sbjct 354181 CAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGAGGAATACCTTCCTTGTCCTG 354240
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | || | || ||||| | |||||||||||| | |||||||||||
Sbjct 354241 GATCTTTGCCTTGACATTTTCGATCGTGTCAGAGGATTCCACCTCAAGGGTAATCGTCTT 354300
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| |||||||| ||||| | ||||||
Sbjct 354301 ACCCGTCAGGGTCTTGACGAACACTTGCAT 354330
>seq38
Length=944797
Score = 123 bits (136), Expect = 2e-23
Identities = 154/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| | ||||| ||||||||||||||||| || | | || | || ||
Sbjct 91207 CACCAAGTGCAAAGTGCTTTCCTTTTGGATGTTGTAGTCACTCAATGTACGGCCATCTTC 91148
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||| ||||| |||||||| ||||| || ||||| || | ||| | ||| || || |||
Sbjct 91147 CAGTTGCTTTCCGGCAAAAATCAACCGTTGCTGGTCCGGAGGAATACCCTCTTTGTCCTG 91088
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
| ||| ||||| | | || |||||| |||||| ||||||| ||| ||||||||
Sbjct 91087 AACCTTGGACTTCACTACATCGATCGTGTCGCTGGATTCAACCTCCAGCGTGATCGTCTT 91028
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || ||||| | ||||||||||||
Sbjct 91027 GCCAGTCAGTGTCTTGATAAAGATTTGCATG 90997
>seq17
Length=3070003
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169
||| |||| ||| | | |||||| ||||| || |||||| ||||||||||| |||
Sbjct 1437807 TCCGCCTCGCAGACGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 1437748
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|||| | |||| || || || || ||||||||||| | ||| || || || | |||
Sbjct 1437747 GAGTGTTCTTCCGTCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGG 1437688
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| || || || || ||||| ||| | || | || || || | ||||| ||
Sbjct 1437687 AATGCCCTCTTTGTCTTGGATCTTAGCCTTAACATTTTCGATCGTATCAGAAGATTCAAC 1437628
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| ||||| ||||| || || | ||||| ||||||| ||||||
Sbjct 1437627 TTCCAAAGTAATGGTCTTGCCAGTCAATGTCTTGACGAAGACTTGCAT 1437580
Score = 87.8 bits (96), Expect = 1e-12
Identities = 153/219 (70%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
||||| ||||| || |||||| ||||||||||| || | || | || |||| ||
Sbjct 1437560 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCACTCAAGGTA-CGTCCGTCCTC 1437502
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| || || ||||||||||| | ||| || || || | ||| | || || || ||
Sbjct 1437501 AAGTTGTTTTCCGGCAAAGATAAGACGTTGTTGGTCCGGAGGAATGCCCTCTTTGTCTTG 1437442
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | || | || || || | || || || |||| ||||| |||||
Sbjct 1437441 GATCTTGGCCTTGACGTTTTCAATCGTATCAGAAGACTCGACTTCCAAAGTAATGGTCTT 1437382
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT-GTGAA 44345
|| || | ||||||||||| | ||||||||| |||||
Sbjct 1437381 GCCAGTCAATGTCTTCACGAAAACTTGCATGATAGTGAA 1437343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990185018233
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |