Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20yamatoensis_20[genbank_20GCA_5F001264885.1_202015-08- 11] 49 sequences; 8,106,837 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq17 123 6e-23 seq38 102 2e-16 seq27 93.3 1e-13 >seq17 Length=3070003 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || | || || || || || || | || || ||| || || Sbjct 1437583 CAAGTCTTCGTCAAGACATTGACTGGCAAGACCATTACTTTGGAAGTTGAATCTTCTGAT 1437642 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| || |||||||| || || ||||||||||| ||| Sbjct 1437643 ACGATCGAAAATGTTAAGGCTAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAACAA 1437702 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| ||||||||||| |||||||| ||||| || || ||| || ||| || Sbjct 1437703 CGTCTTATCTTTGCCGGAAAACAACTCGAAGACGGAAGAACACTCAGCGACTACAACATC 1437762 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1437763 CAGAAGGAGTCTACTCTTCATCTGGT 1437788 Score = 118 bits (130), Expect = 3e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| |||||||||| || | || || || || || || | || || || || || Sbjct 1437355 CAAGTTTTCGTGAAGACATTGACTGGCAAGACCATTACTTTGGAAGTCGAGTCTTCTGAT 1437414 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| || |||||||| || || ||||||||||| ||| Sbjct 1437415 ACGATTGAAAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATTCCTCCGGACCAACAA 1437474 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || |||||||| ||||||||||| || || || ||| | || |||| || || ||| | Sbjct 1437475 CGTCTTATCTTTGCCGGAAAACAACTTGAGGACGGACGTAC-CTTGAGTGACTACAACAT 1437533 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 ||| || || || || || ||||| ||| | ||||| Sbjct 1437534 CCAGAAGGAGTCTACTCTTCATCTGGTTCTCCGACTC 1437570 >seq38 Length=944797 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || | || || || || || || |||||||| || ||||| ||| | ||| Sbjct 91001 CAAATCTTTATCAAGACACTGACTGGCAAGACGATCACGCTGGAGGTTGAATCCAGCGAC 91060 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| ||||||||||||| || || ||||||||||||||| Sbjct 91061 ACGATCGATGTAGTGAAGTCCAAGGTTCAGGACAAAGAGGGTATTCCTCCGGACCAGCAA 91120 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || |||||||| || || |||||||| | || | || || ||| || Sbjct 91121 CGGTTGATTTTTGCCGGAAAGCAACTGGAAGATGGCCGTACATTGAGTGACTACAACATC 91180 Query 178104 CAAAAAGAA 178112 ||||| ||| Sbjct 91181 CAAAAGGAA 91189 >seq27 Length=1447875 Score = 93.3 bits (102), Expect = 1e-13 Identities = 100/131 (76%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 177999 AAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCC 178058 |||| ||| || || || |||||||||||||| ||||| || ||||| |||||||| || Sbjct 257885 AAACCAAA-ATACAAGATAAAGAAGGAATCCCACCGGATCAACAACGTCTTATCTTTGCT 257943 Query 178059 GGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118 || |||||||| || || || | || | |||||| || ||||||| ||||| ||| Sbjct 257944 GGTAAACAGCTAGAGGACGGTCGTACATTGAGCGATTACAATATCCAAAAGGAATCTACA 258003 Query 178119 CTGCATCTTGT 178129 | ||||| || Sbjct 258004 TTACATCTAGT 258014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730444282506