Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 4e-12 >seq2 Length=3834998 Score = 87.8 bits (96), Expect = 4e-12 Identities = 110/147 (75%), Gaps = 3/147 (2%) Strand=Plus/Plus Query 318544 TCGCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGTTGTTGCCATAGA 318603 || || || | |||||| || ||||| ||||||||||| ||||| || | ||||| Sbjct 1997338 TCACGATCCAAGAAGTTAGTGGGTTCATCCAAAACGATGACGTGAGGACGACGCCATGTG 1997397 Query 318604 GCAGC-GCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATG 318662 ||||| ||||| || | || | |||||| || ||||| | |||||| ||| |||| || Sbjct 1997398 GCAGCAGCCAA-GACGACCTTGACCTTTTGACCACCAGACAAACCACGCATGTGAGAGTG 1997456 Query 318663 AGTTGTAAATTCAGGGTCGAG-CCCAA 318688 || || |||||||| || || ||||| Sbjct 1997457 AGAGGTGAATTCAGGTTCAAGACCCAA 1997483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823213904540