Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=6968282 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | |||||||||||||| ||||| ||||| |||| || | |||| || Sbjct 6897782 CACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTGCGACCGTCTTC 6897723 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 || || || || ||| | || | ||| || ||||| || | ||||| ||||| Sbjct 6897722 CAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTG 6897663 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| ||| || | | | | ||||||| || || || | |||||| ||||| Sbjct 6897662 GATCTTGGCTTTGACATTGTCAATAGTATCAGAGGATTCAACCTCAAGGGTAATTGTCTT 6897603 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 || || || || |||||||| |||||||| | ||| Sbjct 6897602 ACCAGTCAAGGTCTTGACAAAGATTTGCATCTGGAA 6897567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258901515528