Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq4 116 3e-21 >seq4 Length=1961900 Score = 116 bits (128), Expect = 3e-21 Identities = 267/397 (67%), Gaps = 4/397 (1%) Strand=Plus/Plus Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCC 97294 |||| |||| || | |||||| || || || ||||| |||| | |||| ||||| Sbjct 1780363 AAAATTGACAAAACATATGACAAGGTGGTAATGCCATCTTTGTTAAATCTGCCGGATTCC 1780422 Query 97295 AAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCT 97354 | |||| || | ||||||| ||| ||||| || | | || ||| ||| | || || Sbjct 1780423 ATGCACTCAAAATTATTCTTCGATCTGTTGGATTATTTTTAATTTTATCAATCA-CTTCT 1780481 Query 97355 -TTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGAC-CTTGATATTCTGCTCC 97412 ||||||||||||| |||| ||| ||||| | | | || || ||||||||||| Sbjct 1780482 CTTAATTGATCAACACCTTGTCCTGTATAATCAT-CATCGCACGTTTTGTATTCTGCTCC 1780540 Query 97413 AAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA 97472 |||||| |||||||| || || || || ||||| || || ||| || ||||| | | Sbjct 1780541 AAAATGTCTCCATTGAAAGCCGTATACTGGTCCTAGATCACCTGCTCGTCTATGCCCAAG 1780600 Query 97473 ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGC 97532 || | || ||| | | || |||||| |||||||||| || | | | | Sbjct 1780601 TCCTCGTGATTCCAAAAATTCCTTACTTCCATTGCCATCCCAAATATGAATGTCTTTTTC 1780660 Query 97533 TGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACC 97592 | | | || ||||| ||| | |||||| || ||||| |||| |||||| Sbjct 1780661 CGTTAACAATTGCGAATCAGTCTTTCCGGCAACAAACCATAATAATTCCTCCAAAACACC 1780720 Query 97593 TCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 ||| |||||| ||||| ||||| | ||||| ||| Sbjct 1780721 TCTGGTAAATACCCTCTTGGTTGTAAGTAGAGGTAAA 1780757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783754867060