Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 4e-11 >seq2 Length=3834998 Score = 84.2 bits (92), Expect = 4e-11 Identities = 162/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || || ||| ||||||| || ||||| || || |||||||||||||| Sbjct 3100767 CCGATACCACCTGCACTCTTGGAAATCATTGCACAAATTTTGAGTGTATCATAAATACCA 3100826 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 |||||| |||||||| | | | | |||||| ||||| | ||| ||| | || Sbjct 3100827 TCAATGGAATCATCTTTCATGGAAACCAAGAAGCATGAGGACATTTGTGGTCTTGGAGTA 3100886 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 ||| ||| || || || || || ||||| ||||| || | || || | ||| Sbjct 3100887 CCAGCATTGAAAAGGGTTGGTGATGCATGTGTAAAGTACTTTTCACTCAAAAGGTTGTAT 3100946 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 |||||||| ||| | | ||| ||||||||| || || || |||||||| | ||| Sbjct 3100947 GTTTCAATTGCAGCATCAACATCTTCTCCGTGAATACCAACGGCAACACGCATCAACAT 3101005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583264615390