Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=6968282 Score = 93.3 bits (102), Expect = 4e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 18793 AATTATAATATTTTATTGTTTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTC 18852 ||| | || |||| | | ||||| || || | | ||||||| |||||| ||||| || Sbjct 6898505 AATGAAAACATTTAACTAGTTTCCACCACGAAGACGCAACACCAAGTGCAAGGTAGATTC 6898446 Query 18853 CTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAAT 18912 |||||| || |||||||| |||| || | |||| |||| |||||||| ||| | || Sbjct 6898445 CTTTTGGATGTTGTAATCAGCCAAAGTACGGCCGTCTTCCAATTGTTTACCTGCAAAGAT 6898386 Query 18913 AAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCC 18972 | | || || || || | || |||||||| ||| || ||| || | | | Sbjct 6898385 CAAACGTTGTTGGTCTGGCGGGATACCTTCTTTGTCTTGAATCTTGGCTTTGACATTGTC 6898326 Query 18973 GACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAA 19032 | || ||| || || ||| | || || || || ||||| || ||||||||||| Sbjct 6898325 AATCGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCTGTCAATGTTTTGACAAA 6898266 Query 19033 AATTTGCAT 19041 |||||||| Sbjct 6898265 GATTTGCAT 6898257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572506948852