Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=6968282 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 |||||||| ||||||||||||||||| ||| | || |||| |||||||| | | Sbjct 5661018 TCCTTTTGGATGTTGTAATCAGCCAAAGTACGCCCATCTTCCAATTGCTTACCAGCAAAG 5661077 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 |||||||| || || || || | || ||||||||| ||| || ||| | | Sbjct 5661078 ATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTTGCCTTAACATTG 5661137 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | || |||||| | || || ||||| || || |||||||| || || ||||| ||| Sbjct 5661138 TCAATAGTATCGTTTGATTCAACCTCGAGGGTGATTGTTTTACCCGTAAGGGTTTTTACA 5661197 Query 48716 AAAATCTGCATCGTG 48730 ||||| ||||| ||| Sbjct 5661198 AAAATTTGCATGGTG 5661212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250902228058