Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq4 102 7e-17 >seq4 Length=1961900 Score = 102 bits (112), Expect = 7e-17 Identities = 171/245 (70%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 20361 AAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCC 20420 |||||||||| |||| ||||| || || | |||||| | || || ||||| |||| Sbjct 1780363 AAAATTGACAAAACATATGACAAGGTGGTAATGCCATCTTTGTTAAATCTGCCGGATTCC 1780422 Query 20421 ACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACG 20480 | |||| || ||| ||||||| ||| ||||||||||| ||| ||| | | | Sbjct 1780423 ATGCACTCAAAATTATTCTTCGATCTGTTGGATTATTTTTAATTTTATCAATCACTTCTC 1780482 Query 20481 ACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGTACGCCGCCCCA 20539 ||||| |||| || || |||||||| ||| |||| | ||| ||| | || ||| Sbjct 1780483 TTAATTGATCAACACCTTGTCCTGTATAATCATCATCGCACGT-TTTGTATTCTGCTCCA 1780541 Query 20540 AAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGG 20599 || || ||||| || || ||||| || ||||| | ||| || | | ||| ||| | || Sbjct 1780542 AAATGTCTCCATTGAAAGCCGTATACTGGTCCTAGATCACCTGCTCGTCTATGCCCAAGT 1780601 Query 20600 CCGCG 20604 || || Sbjct 1780602 CCTCG 1780606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372480004720