Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 3e-13 >seq2 Length=3834998 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 332868 TCACGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGTTGTTGCCATAGA 332927 ||||| || | |||||| || ||||| ||||||||||| ||||| || | ||||| Sbjct 1997338 TCACGATCCAAGAAGTTAGTGGGTTCATCCAAAACGATGACGTGAGGACGACGCCATGTG 1997397 Query 332928 GCAGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGA 332987 ||||| | | || | || | |||||| || ||||| | |||||| ||| |||| ||| Sbjct 1997398 GCAGCAGCCAAGACGACCTTGACCTTTTGACCACCAGACAAACCACGCATGTGAGAGTGA 1997457 Query 332988 GTTGTAAATTCAGGGTCGAGACC 333010 | || |||||||| || ||||| Sbjct 1997458 GAGGTGAATTCAGGTTCAAGACC 1997480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879180422300