Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 8e-15 >seq3 Length=3165745 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||| || | ||| | |||||| | |||| ||||||||||| |||||||| || || | Sbjct 2529687 TCCGCCACGCAAGCGCAAAACGAGATGAAGAGTGCTTTCTTTTTGAATGTTGTAATCGGC 2529628 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 | | ||| | || || | ||||| || ||||| || | ||||| |||||| | || Sbjct 2529627 CAATGTACGTCCGTCTTCTAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGG 2529568 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCT 34929 | || || || || |||||| |||||| | ||||||| ||| | | Sbjct 2529567 AATACCTTCTTTATCCTGAATCTTGGCTTTGAC----GTTATCGATTGTATCAGATGATT 2529512 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || | ||| || ||||||||||| | ||||| |||||||| |||||| Sbjct 2529511 CCACCTCCAAGGTAATAGTTTTTCCCGTCAATGTCTTGACAAAGATTTGCATA 2529459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633370524624