Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2 199 5e-46 >seq2 Length=3834998 Score = 199 bits (220), Expect = 5e-46 Identities = 365/534 (68%), Gaps = 3/534 (1%) Strand=Plus/Minus Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||| |||||||| |||||| ||||||||||||||||| || ||||||||||| || Sbjct 1007766 AACAACAAACATGCGAAATCAGTGTGTAAACCTTCATCTCTGCTGATCAATTCATTGGAG 1007707 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 || || || || ||||| || || | || || | ||| || || ||| || || ||| Sbjct 1007706 AATGTCAAACCGGGCATCAATCCACGCTTCTTGAGCCAGAAGATACTTGCGAATGAACCA 1007647 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 ||||| ||||||||||| || ||||| || || | |||| | | || || | | Sbjct 1007646 CTGAAGAAGATACCTTCAACGGCAGCAAAAGCGACCAAACGTTCAGCAAATGTGGCCCGC 1007587 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | ||||||||||| ||| || ||||||||||||| ||| || | |||||||||| Sbjct 1007586 TTGTCAGAAATCCACTTTAGTGCCCAATCTGCCTTTGTTTTGACGACTGGAATTGTTTCA 1007527 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 || || | || | || | || ||| || || || |||||||| | ||| Sbjct 1007526 ATAGCATCGAACAAGAACTCGCGTTGATCAGGGTCACGGATGTATGTATCAATCAACAAA 1007467 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 || |||| |||||||| ||||| || || || |||||||| || || || ||| Sbjct 1007466 GAGTAAGTTTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAGCATCTTGCT 1007407 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 || | | |||||| || || | | | ||||||||||| || || |||||| Sbjct 1007406 TCTGCTGCTTGAACTTCTCCGCTGAATCGTTCGACCAAGTTTTCATTGACGATACCATCA 1007347 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC---ATCATTTGATAAT 37643 ||| |||||||| || | ||| | || ||||| | ||| || || | Sbjct 1007346 GAAGCGGCAAAGAATGCCAAAACGTGAGAGATGAAATGACGTTCGTTGTCGTTCAACTTG 1007287 Query 37644 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 || | |||||| | | |||||| || ||||||| || || ||||||| ||| Sbjct 1007286 TTGTCCCAATCGTGCAAATCTTTGGACAAATCAATCTCTTCTGCGGTCCAGAAA 1007233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316370570320