Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 122 2e-22 >seq2 Length=3834998 Score = 122 bits (134), Expect = 2e-22 Identities = 371/565 (66%), Gaps = 19/565 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||| || || || || ||||||||| |||||||||||| || Sbjct 1007201 ATTTGGCAAATGTACAAAAAAGCAGAAGCTTCTTTCTGGACCGCAGAAGAGATTGATTTG 1007260 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTCAAG 25593 |||| || || ||| ||| || | || ||| || | ||||| || Sbjct 1007261 TCCAAAGATTTGCACGATTGGGACAACAAGTTGAACGACAACGAACGTCATTTCATCTCT 1007320 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| |||||||||||||| || ||||||||||| || || || || || ||| || Sbjct 1007321 CACGTTTTGGCATTCTTTGCCGCTTCTGATGGTATCGTCAATGAAAACTTGGTCGAACGA 1007380 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | ||||| || | || || | || ||||| |||||||| || || Sbjct 1007381 TTCAGCGGAGAAGTTCAAGCAGCAGAAGCAAGATGCTTCTATGGTTTCCAAATCATGATG 1007440 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGT--CG 25771 ||||| | ||||| || || | | | | ||| |||| |||| ||| | Sbjct 1007441 GAAAACATTCACTCAGAAACTTACTCTTTGTTGAT--TGA--TACA-TACATCCGTGACC 1007495 Query 25772 CCGA-----GAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAG-CATCAAGAGGA 25825 | || | ||| || |||| | ||| || || ||| |||| | |||| | | Sbjct 1007496 CTGATCAACGCGAGTTC--TTGTTCGATGCTATTGA-AACAATTCCAGTCGTCAAAACAA 1007552 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 |||| ||||| | |||||||| | || | || || |||| || || ||| Sbjct 1007553 AGGCAGATTGGGCACTAAAGTGGATTTCTGACAAGCGGGCCACATTTGCTGAACGTTTGG 1007612 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | || |||||||| || || || ||||| ||||| ||||| || || |||||||||| Sbjct 1007613 TCGCTTTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTCATTCGCAAGTATCTTCTGGC 1007672 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||||| || || |||||||| || || ||||| || | |||||||| || | Sbjct 1007673 TCAAGAAGCGTGGATTGATGCCCGGTTTGACATTCTCCAATGAATTGATCAGCAGAGATG 1007732 Query 26006 AGGGTCTCCACAGAGATTTTGCCTG 26030 | ||| | |||| ||||| || || Sbjct 1007733 AAGGTTTACACACTGATTTCGCATG 1007757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844126587520