Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 455 4e-123 seq3 194 2e-44 seq2 163 4e-35 >seq1 Length=6968282 Score = 455 bits (504), Expect = 4e-123 Identities = 832/1212 (69%), Gaps = 16/1212 (1%) Strand=Plus/Plus Query 195297 AAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATC 195356 ||||| | ||||| ||||| || || || ||||||||||||| || ||||||||||| | Sbjct 1554555 AAGCTGTCGGTATTGATTTGGGTACAACCTACTCATGTGTTGCCGTTTGGCAAAATGACC 1554614 Query 195357 GTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTA 195416 |||| || | || | || || ||||| ||||| ||||| ||||| || ||||| || | Sbjct 1554615 GTGTTGAAGTCATTGCCAACGATCAAGGTAACCGCACAACACCATCATATGTTGCATTCA 1554674 Query 195417 CAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCA 195476 |||| | ||||||| | | || ||||||||||| || || || ||||||||| || Sbjct 1554675 CAGACACTGAACGTTTGATCGGTGATGCCGCAAAGAACCAAGTCGCAATGAACCCTCACA 1554734 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | || || || ||||| || ||| | || || ||||| || ||| |||| ||| Sbjct 1554735 ACACAGTTTTCGACGCAAAACGTTTGATCGGACGCAAATTCGATGATGCTGAAGTTCAAT 1554794 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATGATT 195595 ||||| || | ||| | | || || | | |||| ||||| || ||| Sbjct 1554795 CAGATATGAAACATTGGCCATTCACCGTCATTTCAAAAGATGGC----AAGCCAATCATT 1554850 Query 195596 AATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655 | || |||| | ||||| | || || | ||||||||||| || |||||||| Sbjct 1554851 CAAGTCGAATACAAGGGTGAACAAAAGACCTTCACACCCGAAGAAATCTCTTCTATGGTT 1554910 Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715 ||| | |||||| || ||||| ||| ||| | | ||| || || || ||||| ||| Sbjct 1554911 TTGCTAAAGATGCGCGAAACTGCTGAAGCTTACTTAGGTGGAAGCGTCAAGGATGCCGTT 1554970 Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 || ||||| || || ||||||| || || ||||| || || || || || || | || | Sbjct 1554971 GTCACTGTTCCCGCATACTTCAACGACTCTCAACGTCAAGCAACCAAAGATGCCGGTGTT 1555030 Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 || | ||| | ||| | | | || ||||| || ||||| || ||||| ||||| || Sbjct 1555031 ATCTCTGGTTTGAACGTTATGCGTATCATCAACGAGCCAACCGCTGCTGCTATTGCATAC 1555090 Query 195836 GGTCTGGACAAGAA---CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 ||| |||||||||| | | | | ||| || || || | || || ||| | || ||| Sbjct 1555091 GGTTTGGACAAGAAGGGCGAAGCTGGAGAAAAGAACGTTCTCATTTTCGATTTGGGAGGT 1555150 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 ||||| || |||||||| ||| | | || |||| ||||| |||||||| ||||||||| Sbjct 1555151 GGTACTTTCGATGTCTCCCTTTTGACAATCGAAGAAGGTATTTTCGAAGTCAAGGCTACT 1555210 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT 196012 |||||||| ||||| | ||||||||||| || || |||||| || || || | Sbjct 1555211 GCTGGTGACACTCACTTGGGTGGTGAAGACTTTGACAATCGTCTTGTCAACCACTTCGTT 1555270 Query 196013 GATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGG 196072 | || ||| || || ||||| || | | || || | ||||| ||||| Sbjct 1555271 CAAGAATTCAAGCGTAAATCAAAGAAGGACTTGACATCCAACGCTCGTGCTCTCCGTCGT 1555330 Query 196073 CTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTT 196132 | | || |||||||||||||| || || || || || ||| | |||||||| | | Sbjct 1555331 TTGCGTACAGCATGTGAACGTGCTAAGCGTACACTTTCATCTGCCGCTCAAACTTCGATC 1555390 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 || || ||||| ||||| || || ||||||||||| || |||| |||||||| ||||| Sbjct 1555391 GAAATCGATTCATTGTTCGAGGGTATTGACTTCTACACTTCTATCACCCGTGCTCGTTTC 1555450 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252 ||||| || | ||| ||||| | ||| || || || || | || | ||| Sbjct 1555451 GAAGAATTGTGCGGTGACTTGTTCTCCCACACTATCGAGCCAGTCGAGAAGGTCTTGCGT 1555510 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 || | ||||| || || ||| | ||||| ||| | || || || || || ||| Sbjct 1555511 GATTCCAAGATTGACAAAGGATCCGTTCACGAAATCGTCTTGGTTGGTGGTTCCACTCGT 1555570 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAAAC 196371 ||||| | ||| || || || | | ||||||||| || ||| || | Sbjct 1555571 ATTCCCCGTGTCCAAAAGTTG-TTGCGCGACTTCTTCAACGGCCGTGAGCCAAAAAAGTC 1555629 Query 196372 GATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||||||| ||||| || |||||||| ||||| || ||||| ||||| |||||||| || Sbjct 1555630 TATCAACCCTGATGAGGCTGTTGCTTACGGTGCCGCTGTTCAAGCTGCCATTCTCTCCGG 1555689 Query 196432 TGTTGACAAT---AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 ||||| | | || ||||||||| || | | || ||||| || | || | Sbjct 1555690 ---TGACACTTCCGAAAAGACTCAAGATCTTTTGTTGTTGGACGTTGCCCCATTGTCTAT 1555746 Query 196489 GGGTCTTGAAAC 196500 |||| ||||||| Sbjct 1555747 GGGTATTGAAAC 1555758 Score = 219 bits (242), Expect = 6e-52 Identities = 1008/1577 (64%), Gaps = 59/1577 (4%) Strand=Plus/Minus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 ||| ||||| ||||| || || || || |||||||| ||||| | || | |||||| Sbjct 6932310 TATCGGTATTGATTTGGGTACAACATATTCATGTGTCGGTGTTCAACGTAAAGGTCGTGT 6932251 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 ||| ||||| | || || ||||| || |||| ||||| || | || || || || Sbjct 6932250 AGAAATTATTGCAAACGATCAAGGTAATCGTATCACTCCTTCTTGGGTCGCTTTCGGTGA 6932191 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATAC 195480 | |||||||| | |||| || || ||||| ||||| | || || || ||| Sbjct 6932190 TGATGAACGTTTAATTGGTGACGCTGCAAAGAATCAAGCTGCACAAAATCCAGAACGTAC 6932131 Query 195481 TGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGA 195540 ||||||| || |||||| | |||||||| | ||| | ||| | | || Sbjct 6932130 AATCTTTGATGCCAAGCGTTTAATTGGTCGTGCATGGAACGATCCTGATGTCAAGAAAGA 6932071 Query 195541 TATAAAGGACTGGTCTTATGAAGTTGTTCC-CGGTGTGGCTGATAAGCCTATGATTAATG 195599 | ||| | | || | ||| ||| | | || |||| | || || Sbjct 6932070 TGCTCGTCACTTCCCCTTCAAATTGGTTGAACGG---GACGGAAAAGCTGCT-ATCTCTG 6932015 Query 195600 TTGAATTTCACGGTGAGAAGAAACA----ATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655 ||||| ||| ||| ||| | | ||| |||| |||||||| || | ||||| Sbjct 6932014 TTGAAGTTCGCGG----AAGTACCCGTACATTCACTCCTGAAGAAATCTCTGCCATGGTC 6931959 Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715 ||| |||||||| || || || ||| ||| | || | | || | | || ||| Sbjct 6931958 TTGCAAAAGATGAAAGAAACAGCAGAAGCTTATTTAGGCCACAAGGTCACTCACGCCGTT 6931899 Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 || || || || || ||||||| ||| | ||||| || || |||||||| || | | | Sbjct 6931898 GTTACCGTTCCAGCATACTTCAATGACGCCCAACGTCAAGCCACAAAGGATGCAGGTACA 6931839 Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 ||||| ||| | | | | | | || |||| ||||| ||||| || |||||||| || Sbjct 6931838 ATTGCCGGTTTGACCGTTTTGCGTATCGTCAACGAACCCACAGCTGCAGCAATTGCATAC 6931779 Query 195836 GGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 ||| |||||||||| || || | ||| |||| | | |||| | ||||||||| Sbjct 6931778 GGTTTGGACAAGAA---GGGTGACTCTCAAATC--ATTG-TGTATGATTTGGGTGGTGGT 6931725 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || ||| | ||| |||| |||| |||| ||||| |||||||||| Sbjct 6931724 ACTTTCGATGTTTCTCTTTTATCTATCGAAGATGGTGTATTTGAAGTCTTGGCTACTGCT 6931665 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT-GA 196014 |||||||||||| | |||||||||||||||||| ||| |||||| | ||| | Sbjct 6931664 GGTGATACTCATTTGGGTGGTGAAGATTTCGATAACCGT-GTCTCCGAATATATTCTCAA 6931606 Query 196015 TGAGTTCCGTCGAAAGAATAAGAAAGATAT------TTCTGGAAATCCTAGGGC--TCTT 196066 | ||| ||||| ||| ||| | | ||||| || | || || | | Sbjct 6931605 ACAATTC------AAGAAGAAGGAAGGTTTGGACGCATCTGGTAA--CAAGCGCAGTGTG 6931554 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAAC--TCTCTCTTCTACGGCTCAAA 196124 || ||| | || | ||||||||| || || || | || || | | || | Sbjct 6931553 GGTAAACTTCGTCGTGAAGTTGAACGTGCAAAGCGTACGTTGTCCAGTCAAATG-TC-CA 6931496 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184 ||| |||| || || || |||||||||| ||||| | ||| | || |||| Sbjct 6931495 CAAAAATTGAAATCGAAAGCTTCTTTGACGGAAAGGACTTGTCAGAAACCTTGACTCGTG 6931436 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAG 196244 | || ||||| || ||| | || | || | || ||| | || |||||||||| Sbjct 6931435 CTAAATTCGAAGAATTGAACGCAGACCTTTTCCGCAAAACGATGAAGCCCGTTGAACAAG 6931376 Query 196245 TACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGAT 196304 | | || || | | ||| | | ||||| |||| | || || || | Sbjct 6931375 TCATCAAAGATGCTGGTGTTAAAAAGGAAGATATCGATGATGTTGTTTTGGTCGGTGGTT 6931316 Query 196305 CAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTA 196363 | || |||||||| ||| ||||||| || || || ||||| | |||||| | Sbjct 6931315 CCACGCGTATTCCAAAGGTTCAACA-ATTGTTGAAAGAATTCTTTGACGGTAAAGAGCCA 6931257 Query 196364 AACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATT 196423 | ||| || ||||| |||||||| ||||||| ||||| || ||||| | || | || Sbjct 6931256 AGTAAAGGTATTAACCCTGATGAAGCTGTTGCTTGGGGTGCTGCGGTTCAAGGTGGTGTT 6931197 Query 196424 CTCTCAGGTGTTGACAATAATAACGTCCA--AGATCTTCTGCTACTTGATGTTGCACCCG 196481 | | |||| || || || || |||| | || | |||||||| || Sbjct 6931196 TTGGCCGGTGATG--------AAGGTGCAGCAGATGTCTTGTTGATTGATGTTAACCCTC 6931145 Query 196482 TATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAA 196541 | | || ||| |||||||| | ||||| || ||||| || | || | ||||| Sbjct 6931144 TTACACTTGGTATTGAAACAACAGGTGGAGTGATGACAAAGTTGATCCCACGTAACACCG 6931085 Query 196542 CTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAGGTGT 196599 ||||| || |||||| ||| |||||| || | ||||||| ||| | ||| Sbjct 6931084 TCATTCCTACCAAGAAGTCTCAA--ATTTTCAGTACTGCTGCCGATAACCAAAACGTTGT 6931027 Query 196600 TCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAA 196658 |||||||| | ||||| ||||| | | || | | ||||| | | || | Sbjct 6931026 CTTGATTCAAGTGTTCGAAGGTGAACG-TGCTTTGACGTCTCAGAACCACATGTTGGGTA 6930968 Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 ||||| || || || || ||| |||| || ||||||| ||||| || | || | Sbjct 6930967 AATTCGAATTAACTGGTATCCCACCTGCTCCTCGAGGTGTACCACAAATCGAAGTCACTT 6930908 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778 |||| | |||||||| ||||| | || || | |||| || || | | || |||| Sbjct 6930907 TCGAATTGGACGCAAACGGAATCATGAAAGTTTCCGCTGCTGATAAAGGAACAGGAAAAT 6930848 Query 196779 CTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTA 196838 | |||| || || ||||| || || || || | || | || ||||| || | Sbjct 6930847 CCGAAAGTGTTACCATCACCAACGATAAAGGTCGTTTGACTGAAGAACAAATTCAAAAGA 6930788 Query 196839 TGGTTCAAGATGCGGAA 196855 |||| |||| || ||| Sbjct 6930787 TGGTCAAAGAAGCTGAA 6930771 Score = 185 bits (204), Expect = 1e-41 Identities = 180/232 (78%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || Sbjct 5661208 ATGCAAATTTTTGTAAAAACCCTTACGGGTAAAACAATCACCCTCGAGGTTGAATCAAAC 5661149 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || ||||||||||| |||||||| |||||||| || || Sbjct 5661148 GATACTATTGACAATGTTAAGGCAAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 5661089 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| | || ||||||||||| || | |||||||| ||||| | |||||||||||| Sbjct 5661088 CAACGTTTAATCTTTGCTGGTAAGCAATTGGAAGATGGGCGTACTTTGGCTGATTACAAC 5661029 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAA 172093 | |||||||| || || | ||| | || | | || || |||||||||| Sbjct 5661028 ATCCAAAAGGAATCCACCTTGCACTTGGTCTTGCGTCTCCGTGGTGGTGCAA 5660977 Score = 176 bits (194), Expect = 6e-39 Identities = 328/474 (69%), Gaps = 11/474 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || ||||||||||| || || |||||||| ||||||||| ||| || || ||| Sbjct 845210 GCCATCGGTATCGATTTGGGTACCACTTACTCTTGTGTTGGTTGGTGGACCAACGAACGT 845269 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || | ||||||||||| |||||||| || || || ||||| || || || Sbjct 845270 GTGGAAATCATTGCCAATGACCAAGGTAACCGTACCACACCTTCTTACGTCGCTTTCACC 845329 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCT-ATCAA 195477 || ||||||| | |||| ||||||||||| || || | || ||||||||| |||| Sbjct 845330 GAATCTGAACGTTTGATTGGTGATGCCGCAAAGAACCAAGCTGCCATGAACCCTCGTCAA 845389 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAA---GAAAGTCCA 195534 || || || || || || ||| | || || || ||||| ||| | ||||| | Sbjct 845390 -ACCGTTTTCGATGCTAAACGTTTGATCGGACG-TCGTTTT--GATGACCCAGAAGTCAA 845445 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| ||| || ||| | | | || | || | || Sbjct 845446 GAAAGATATGACCAACTGGCCTTTCACCGTCGTTGACAAAGAAG--GA-AGTCCATTCAT 845502 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | | ||||||| ||||| ||||| ||||| |||| ||||||| || ||||||| Sbjct 845503 TGAAGTTGAATACTTGGGTGAAAAGAAGCAATTCTCTCCTCAAGAAATCTCTGCTATGGT 845562 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGT 195714 |||| ||||||||||| | ||| ||| | || |||||| || || | ||||| Sbjct 845563 TTTGACCAAGATGAAGGAAATTGCCGAAGCAAAGATCGGTAAAGAAGTTAAGAAGGCAGT 845622 Query 195715 TGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGC 195768 ||| || || || || ||||||| || || ||||| ||| || ||||| || Sbjct 845623 TGTCACAGTTCCCGCATACTTCAACGACTCTCAACGTTTGGCAACCAAGGATGC 845676 Score = 174 bits (192), Expect = 2e-38 Identities = 418/629 (66%), Gaps = 10/629 (2%) Strand=Plus/Plus Query 195800 ATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAA 195859 || ||||| ||||| || || || || ||||| || ||| |||||| ||| || | Sbjct 845902 ATCATCAACGAACCTACCGCTGCCGCCATTGCATACGGTTTGGACAG---CAAATCCGCA 845958 Query 195860 ---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTC 195916 || || || || ||||| || ||| | || |||||||| || ||||| || | | Sbjct 845959 ACCGAGAAGAACGTTTTGATTTTCGATTTGGGAGGTGGTACTTTCGATGTTTCTTTGTTG 846018 Query 195917 AATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGT 195976 || || |||||| | |||| || ||||| ||||||||||| ||||| | |||||| Sbjct 846019 AACATCACCGGTGGTGTTTTCGCCGTCAAGGCAACTGCTGGTGACACTCACTTGGGTGGT 846078 Query 195977 GAAGATTTCGATGCACGTCTTCTCCGT--CATTTGTCTGATGAGTTCCGTCGAAAGAATA 196034 ||||| || || || |||| | || || | || ||| || ||| | | Sbjct 846079 GAAGACTTTGA--CAACTCTTTGTTGGACCACTTTAAGAAGGAATTCGAACGCAAGCACA 846136 Query 196035 AGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTG 196094 || ||| || ||||| | || | || ||||| ||| | | || |||||||||| Sbjct 846137 AGGCAGACATCTCTGGTGACCCACGTGCAACCCGTCGTCTTCGTTCCGCTTGTGAACGTG 846196 Query 196095 CCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACG 196154 | || || ||| | || | ||||||| | || || |||| || ||||| ||| Sbjct 846197 CTAAGCGCACTTTGTCAAGTGTTACTCAAACCACCGTCGAAGTTGACTCTTTGTTCAACG 846256 Query 196155 GAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGT 196214 | |||||||| | ||| || |||||||| ||||| |||||| | ||| ||| | | Sbjct 846257 GTGTTGACTTCCAAGCAAACATCACCCGTGCTCGTTTCGAAGAGATCAACGCTGCTGCAT 846316 Query 196215 TTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTA 196274 | | || | |||| ||||| || | || | || || ||||||| | || Sbjct 846317 TCAAGAGCACTTTGGACCCTGTCCAAAAGGTTTTGAAGGATGCTAAGATGGCTGCTGATA 846376 Query 196275 AGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGC 196334 ||||||| || || ||| | || || ||||| || ||||| || || |||||| | Sbjct 846377 AGGTTGACGATATCGTCTTGGTCGGTGGATCTACTCGTATCCCTAAAATTCAATCTCTCG 846436 Query 196335 TTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTG 196394 |||| || ||| | | || |||||| | |||||||| || ||||| || | Sbjct 846437 TTTCCGAATTGTTCGGTGGACGTCAATTGAACAAATCCATCAACCCTGACGAAGCTGTCG 846496 Query 196395 CTTATGGTGCGGCCGTTCAGGCTGCTATT 196423 | || ||||| || ||||| |||||| || Sbjct 846497 CATACGGTGCTGCTGTTCAAGCTGCTGTT 846525 Score = 170 bits (188), Expect = 3e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| ||||| | || ||||| || ||||| | || ||||| | Sbjct 6898252 GTGGTATGCAAATCTTTGTCAAAACATTGACAGGAAAGACGATCACATTGGAAGTTGAAT 6898311 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || || ||||||||||||||||||| || ||||| || || || | Sbjct 6898312 CTTCCGACACGATTGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGGTATCCCGCCAG 6898371 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| | || ||||| |||||||| | ||||| || ||||| | ||||||| Sbjct 6898372 ACCAACAACGTTTGATCTTTGCAGGTAAACAATTGGAAGACGGCCGTACTTTGGCTGATT 6898431 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | |||||||| ||||| | ||| | || | | ||||| ||||| Sbjct 6898432 ACAACATCCAAAAGGAATCTACCTTGCACTTGGTGTTGCGTCTTCGTGGTGG 6898483 Score = 161 bits (178), Expect = 1e-34 Identities = 163/210 (78%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTG--A 171914 || |||||||||||||||| || || |||||||| || || ||||| || || || | | Sbjct 6898024 GTGGTATGCAAATCTTTGTCAAGACACTTACTGGTAAGACAATCACACTAGAAGTCGAAA 6898083 Query 171915 GTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACC 171974 | || || ||||| ||||| ||||||||||||| ||||| || ||||| |||||||| Sbjct 6898084 GCAGT--GATACAATTGATAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATTCCACC 6898141 Query 171975 CGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGA 172034 || || ||||| || ||||| |||||||| || | ||||| ||||| || | ||||| Sbjct 6898142 AGACCAACAACGTCTCATTTTCGCTGGTAAGCAATTGGAAGACGGACGCACATTGGCTGA 6898201 Query 172035 TTACAACGTTCAAAAGGAGTCTACTCTACA 172064 |||||| | ||||| ||||| || |||| Sbjct 6898202 CTACAACATCCAAAAAGAGTCCACCTTACA 6898231 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || ||| | ||||| || || || ||||| |||||||| || || Sbjct 6897573 ATGCAAATCTTTGTCAAGACCTTGACTGGTAAGACAATTACCCTTGAGGTTGAATCCTCT 6897632 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || ||||||||||||| ||||| || ||||| || ||||| || || Sbjct 6897633 GATACTATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAA 6897692 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | || ||||| ||||| || | ||||| || || || | ||||| |||||| Sbjct 6897693 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGTCGCACTTTGGCTGACTACAAC 6897752 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||||||| || || ||| | || | | || || |||||| Sbjct 6897753 ATCCAAAAGGAGTCCACACTTCACTTGGTGTTGCGTCTCCGTGGTGGT 6897800 Score = 156 bits (172), Expect = 6e-33 Identities = 148/189 (78%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 171885 TACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGC 171944 ||| || || || |||||||| ||||| ||||| || ||||||||||| ||| |||| || Sbjct 595349 TACAGGTAAGACCATCACCCTTGAGGTGGAGTCATCCGACACAATCGACAACGTCAAGGC 595408 Query 171945 CAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAA 172004 ||||| ||||| |||||||| |||||||| || || ||||| | || |||||||| || Sbjct 595409 TAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAACAACGTTTGATCTTTGCTGGAAA 595468 Query 172005 ACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACA 172064 || | |||||||| | || | |||||||||||| | |||||||| |||||| | || Sbjct 595469 GCAATTGGAAGATGGCAGAACTTTGGCTGATTACAACATCCAAAAGGAATCTACTTTGCA 595528 Query 172065 CCTTGTTCT 172073 | | || || Sbjct 595529 CTTGGTCCT 595537 Score = 152 bits (168), Expect = 7e-32 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||| ||||| || || || || ||||| || ||||| || || || || Sbjct 6897796 GTGGTATGCAAATTTTTGTCAAGACACTAACAGGAAAGACAATCACACTAGAAGTCGAAA 6897855 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 ||||| || || ||| ||||||||||||| ||||| || ||||| || ||||| | Sbjct 6897856 GCAGCGACACTATTGAYAACGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCACCAG 6897915 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| | || ||||| |||||||| | ||||| ||||| || | ||||||| Sbjct 6897916 ACCAACAACGTTTGATCTTTGCAGGTAAACAATTGGAAGACGGACGCACATTGGCTGATT 6897975 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| || || ||||| || ||| | || | | || || |||||| Sbjct 6897976 ACAACATTCAGAAAGAATCTACACTCCACTTGGTCTTGCGCCTCCGTGGTGGT 6898028 >seq3 Length=3165745 Score = 194 bits (214), Expect = 2e-44 Identities = 172/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || || | || ||||||||||| ||| | ||||| || | Sbjct 2529455 GTGGTATGCAAATCTTTGTCAAGACATTGACGGGAAAAACTATTACCTTGGAGGTGGAAT 2529514 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || |||||||||||| |||||||||||||||| ||||| ||||| |||||||| | Sbjct 2529515 CATCTGATACAATCGATAACGTCAAAGCCAAGATTCAGGATAAAGAAGGTATTCCACCAG 2529574 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| | || |||||||||||||| | ||||| |||||||| | || |||| Sbjct 2529575 ACCAACAACGTTTGATCTTTGCTGGTAAACAATTAGAAGACGGACGTACATTGGCCGATT 2529634 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTT 172071 ||||| ||||||| || ||||| || || ||| Sbjct 2529635 ACAACATTCAAAAAGAAAGCACTCTTCATCTCGTT 2529669 Score = 179 bits (198), Expect = 5e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 ||||||||||||||| ||||| | || ||||| || ||||| | |||||||| || || Sbjct 2529231 TATGCAAATCTTTGTAAAAACTTTGACCGGAAAGACGATCACTTTGGAGGTTGAATCTTC 2529290 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 || || || || ||| |||| |||||||||||||| || ||||| |||||||| ||||| Sbjct 2529291 GGATACCATTGACAACGTCAAGGCCAAGATTCAAGACAAAGAAGGTATTCCACCAGATCA 2529350 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| ||||| ||||||||||| || | |||||||| ||||| | || |||||||| Sbjct 2529351 ACAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGTACATTGGCCGATTACAA 2529410 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | |||||||| || || || || ||| | || | || |||||| Sbjct 2529411 TATCCAAAAGGAAAGCACACTCCATCTCGTTTTGAGATTACGTGGTGGT 2529459 >seq2 Length=3834998 Score = 163 bits (180), Expect = 4e-35 Identities = 767/1202 (64%), Gaps = 31/1202 (3%) Strand=Plus/Minus Query 77950 ACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGT 78009 ||| ||| | | || ||||||||| | |||||||||| ||| | ||| || || | Sbjct 3101015 ACCACAACATATGTTGATGCGTGTTGCCGTTGGTATTCACGGAGAAGATGTTGATGCTGC 3100956 Query 78010 ACTTGAAACGTATGATAAAATGTCCAATGGTATGT---TTATTCACGCAACACCTACTTT 78066 | ||||||| || || | | | || | || ||| || ||| |||| || | Sbjct 3100955 AATTGAAACATAC---AACCTTTTGAGTGAAAAGTACTTTACACATGCATCACCAACCCT 3100899 Query 78067 GTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGA 78126 || ||||| |||||||| | ||||| ||||| || || ||| | || | | || || Sbjct 3100898 TTTCAATGCTGGTACTCCAAGACCACAAATGTCCTCATGCTTCTTGGTTTCCATGAAAGA 3100839 Query 78127 GGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGC 78186 || || ||| ||||||| || | || |||| | ||||| |||||| ||| | || Sbjct 3100838 TGATTCCATTGATGGTATTTATGATACACTCAAAATTTGTGCAATGATTTCCAAGAGTGC 3100779 Query 78187 TGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGG-ATTAGAGGAA 78245 |||||||| || | | |||||| | |||| | || || | || ||| ||| | Sbjct 3100778 AGGTGGTATCGGATTAAACATTCACAACATTCGCGGAA-CAGGATCATACATTGCAGGTA 3100720 Query 78246 CTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCT 78305 | || || | | || || | |||||| | | ||||| || | || || || | Sbjct 3100719 CAAACGGAACAAGTAACGGTATCGTACCTATGTTGCGTGTATTTAACACAACTGCTCGTT 3100660 Query 78306 ATGTCAACCAAGCGGGTCGTAGGAAG--GGGT-CATTCGCTATGTACCTTGAACCTTGGC 78362 |||| | |||| ||| | || |||| | || || | ||| ||||||| |||| Sbjct 3100659 ATGTTGATCAAGGAGGTAACAAGAGACCGGGTGCTTTTGCCGTTTACGTTGAACCATGGC 3100600 Query 78363 ACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGAT 78422 | | ||||| | || || ||||| | || || || || | || |||| ||| | Sbjct 3100599 ATTCAGATGTGTTTGAATTCTTGGATTTACGCAAAAATCACGGAAAAGAAGAAGTTCG-T 3100541 Query 78423 GCAGG-GATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAA 78481 ||| | || ||||| |||| | |||||||| || | || |||||| | ||||| || Sbjct 3100540 GCACGTGAACTATTCTATGCTCTATGGATTCCAGACTTGTTCATGAAGCGTGTTGAACAA 3100481 Query 78482 GGAGGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGGG 78541 ||| |||||| | | || || | | | ||| | | ||| ||||| Sbjct 3100480 AATGGTGAATGGTGCTTGATGTGCCCCAACGAATCCCCTGGTTTGGCTGATTGTTACGGT 3100421 Query 78542 GAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATT 78601 |||||||| |||||| | ||| |||||| || |||| | | |||| || Sbjct 3100420 GAAGAATTTGAAAAACTTTACGAGTCTTACGAAAAGCAAGGCAGATATGTAAAGAAGATC 3100361 Query 78602 GATGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTAT 78661 | ||| | | ||| | |||||| | || |||||| || || || | ||| | Sbjct 3100360 AAAGCACAAAAGTTGTGGTATGCTATTCTTGAATCTCAAACTGAAACTGGTAACCCATTC 3100301 Query 78662 ATGCTATACAAAGA--CAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCA 78719 ||| | |||||||| |||| |||||||| |||||||||||| | ||| ||||| Sbjct 3100300 ATGTTGTACAAAGATGCAGCA--AACAGAAAAAGTAACCAAAAGAATTTGGGTACCATCA 3100243 Query 78720 AAAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGTAT 78779 | | ||||||| | |||||||||||| | |||||| | ||||| || || | Sbjct 3100242 AGAACTCTAACTTGTGCACAGAAATTATTGAATACTGTGCACCTGATGAAGTTGCCGTGT 3100183 Query 78780 GTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATT 78839 | ||| | | || || ||| | |||| | ||||| | | | |||||| | |||| Sbjct 3100182 GCAATTTGGCTTCGATTGCTTTGCCAACCTACGTTGACCCTGCAACAAAGACTTATGAT- 3100124 Query 78840 ATTCA--AAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGA 78897 |||| ||| | |||| | || | ||| | | | || || || | ||||| Sbjct 3100123 -TTCAAGAAGTTACACGCAGTTGCCAAAGTGATCTGTGGTAACTTGAACAAAATTATTGA 3100065 Query 78898 CCGTAACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGG 78957 || || ||||||||||| || ||||| ||| || | || || || Sbjct 3100064 TATCAATTATTACCCAGTCGAAGAAGCACGCAGATCTAACATGCGTCACCGTCCTATCGG 3100005 Query 78958 TCTAGGTGTTCAAGGATTGGCAGATGTATTCAACTTGTGTGGTCTTCCCTTCGATT---G 79014 | | || || | || | ||||||| ||||| | | ||| | |||||||||| Sbjct 3100004 TATCGGAGTCAACGGTCTTGCAGATGCATTCATGATCTTGGGTATGCCCTTCGATTCACC 3099945 Query 79015 CGAAGATTCAAGGACTATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGA 79074 ||||| || | | |||| | ||| || || || || || || ||||| ||||| || Sbjct 3099944 CGAAG---CACGCAAATTGAACGTTCAAATCTTTGAAACGATCTACCATGCTGCTTTGGA 3099888 Query 79075 AGCAAGTTCAGAACTTGCTGA--AATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCC 79132 ||||| ||| | ||| | ||||| || | ||||| | | |||||| || || Sbjct 3099887 GAGAAGTTGCGAATTGGCTAAAGAATTA--GGAACATATGAAACATACGAGGGATCCCCT 3099830 Query 79133 GC 79134 || Sbjct 3099829 GC 3099828 Score = 104 bits (114), Expect = 3e-17 Identities = 222/329 (67%), Gaps = 12/329 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || || | | | | |||| || | || || | || || | ||| Sbjct 3374129 AAGATGAAGGAAACCGCTGCAGGATACTTGGGAAAGCCAGTCAAGCACGCCGTCATTACT 3374070 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||||||||| | || || ||||| || || |||||||| || | | | ||||| Sbjct 3374069 GTCCCTGCTTACTTTAACGACTCTCAACGTCAAGCAACAAAGGATGCAGGTACAATTGCC 3374010 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||| | || ||| | |||| || |||||||| || ||||| ||||||| ||||| Sbjct 3374009 GGTTTGGACGTTCTCCGTGTTATTAACGAACCAACTGCCGCTGCTCTTGCTTACGGTCTT 3373950 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGT-ATTGATCTTT--GATCTCGGTGGTGGTACG 195898 ||||| | || | | || ||| || | | ||| ||| | || |||||||| Sbjct 3373949 GACAA--ATCAGAAAGCAG-------TGTTATCGCTGTTTTCGATTTGGGAGGTGGTACA 3373899 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || |||||||| | | | || || ||| | || ||||| || |||| ||| Sbjct 3373898 TTCGATGTCTCCATCTTGGAAATGCAAAAGGGTGTCTTTGAAGTTAAATCTACAAACGGT 3373839 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || | ||||||||||| || || Sbjct 3373838 GACACACACTTGGGTGGTGAAGACTTTGA 3373810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861923049760