Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-12 >seq3 Length=3165745 Score = 91.5 bits (100), Expect = 2e-12 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| |||| ||||||||| || |||| ||||||| ||| || ||| || ||| Sbjct 3126894 GTACTTGGTAACGGACTTGGTACCTTCAGAGATGGCGTGCTTGGACAATTCACCTGGCAA 3126835 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| || | ||||| ||||| || || | ||| ||| |||||||| | Sbjct 3126834 GATCAAACGAGCAGCGGTTTGGATTTCACGAGATGAGATTGTGGAACGCTTGTTGATAGC 3126775 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 |||| | || |||||| | | || || | | || | || || ||||||| Sbjct 3126774 AGCCAATTTGGAAGCTTCGGTGGCCAAACGTTCAAAGACATCTTGTACGAAAGAGTTCAA 3126715 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698 ||| | ||| | ||||||||||| || ||| ||||| || ||||| Sbjct 3126714 GATTGCCATTGCCTTGTTGGAGATACCAGTGTCAGGGTGAACTTGCTT 3126667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916240230275462