Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 6e-14 >seq4 Length=1961900 Score = 93.3 bits (102), Expect = 6e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 180550 AGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATAT 180609 || ||||||| |||||||| | || || ||||||||||||||| ||||| |||| | Sbjct 1780586 AGCAGGTGATCTAGGACCAGTATACGGCTTTCAATGGAGACATTTTGGAGCAGAATACAA 1780527 Query 180610 TGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAAC 180669 || ||| | |||| || |||||| | || |||||||| |||| || || | Sbjct 1780526 AACGTGCGATGATGATTATACAGGACAAGGTGTTGATCAATTAAGAGAAGTGATTGATAA 1780467 Query 180670 TATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGGAATGTATCACAATT 180729 || ||||||||||| | ||||||||||| | | |||||| || | || Sbjct 1780466 AATTAAAAATAATCCAACAGATCGAAGAATAATTTTGAGTGCATGGAATCCGGCAGATTT 1780407 Query 180730 ACCAGATATGGCTCTTCCACCATGTCA-CTGTTTGGTACAATTTT 180773 | || | ||||| | ||||| ||||| ||||| || ||||||| Sbjct 1780406 AACAAAGATGGCATTACCACCTTGTCATATGTTTTGT-CAATTTT 1780363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279524922000