Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 >seq3 Length=3165745 Score = 91.5 bits (100), Expect = 1e-13 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTA---TGTTTGACTCTTTTTGAATGTTGTAGTCGCTCAT 131958 ||||||||||||||| | ||| | || || ||||||||||||||||| ||| || Sbjct 2529681 ACGCAAGCGCAAAACGAGATGAAGAGTGCTT---TCTTTTTGAATGTTGTAATCGGCCAA 2529625 Query 131959 GGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTAT 132018 ||||| ||||| | |||||||| | | |||| | ||| ||||| ||||| || || Sbjct 2529624 TGTACGTCCGTCTTCTAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGTGGAAT 2529565 Query 132019 GCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTC 132078 ||||||||||| ||| || ||| | | || | ||||| | | ||||| || Sbjct 2529564 ACCTTCTTTATCCTGAATCTTGGCTTTGACGTTATCGATTGTATCAGATGATTCCACCTC 2529505 Query 132079 GACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || | ||||| || |||| || || | || || ||||| Sbjct 2529504 CAAGGTAATAGTTTTTCCCGTCAATGTCTTGACAAAGATTTGCAT 2529460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610854456880