Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 seq1 87.8 2e-12 >seq3 Length=3165745 Score = 95.1 bits (104), Expect = 1e-14 Identities = 204/305 (67%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 139183 GAACCATTTGTTCCATTTTTAAAGCCAACGCACATAGGCAGGCCTGAAGCAATTTCACGG 139242 ||||||| ||||||||| || || || | || |||| | ||||||| | |||||| Sbjct 693525 GAACCATCTGTTCCATTCTTGAAACCGATGCTCATACTTAAACCTGAAGATAATTCACGA 693584 Query 139243 TGTGTCTGACTCTCGGTTGTACGAGCGCCGATTGCGACCCAAGAGAAAATACCTGTAAGA 139302 || ||| || || |||||||| || ||||| ||||| || | | | | | | Sbjct 693585 TGAACTTGAGATTCTGTCGTACGAGCACCTATTGCACCCCAACTGATCAAATCGGCAGTA 693644 Query 139303 TACTTAATCGTGAATGGGTCCAACACTTCAGTCGCTAGTGGAAGGCCTAAGCTTAATAGT 139362 || | | ||| || || || | ||| || || || | || | | | | Sbjct 693645 TATTGAGGACTGATTGTATCTAAGAATTCCGTACCTGCAGGTAAACCCATTTCTGCGATT 693704 Query 139363 TCTAAGCAAAGTTCGCGAGCCATTTCGAGCCCACGGTTTATGTCAAATGAGCCATTCAAT 139422 || || |||| | ||||| | | | || || || | ||| || ||||| | Sbjct 693705 TCCAATAAAAGGCCACGAGCAAGTCTTAAACCTTTATTAATTTGAAAAGATCCATTAAGG 693764 Query 139423 TCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACA 139482 | ||| |||||||| |||||||||||||| || |||||||||||||| || ||||||||| Sbjct 693765 TTTGGATCGTTAATTAAACCTTTCCAACCAACTGTTGTTCTTGGTTTTTCGAAATAAACA 693824 Query 139483 CGCAT 139487 ||||| Sbjct 693825 CGCAT 693829 >seq1 Length=6968282 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 139408 AATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGGT 139467 || || || | ||| || || |||||||| ||||||||||| || || || ||||||||| Sbjct 571380 AAAGATCCGTCCAAATCAGGATCGTTAATTAAACCTTTCCAGCCAACTGTAGTTCTTGGT 571439 Query 139468 TTCTCAAAATAAACACGCATAACCAA 139493 || ||||| ||| ||||||||||||| Sbjct 571440 TTTTCAAAGTAAGCACGCATAACCAA 571465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568329187961040