Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq3 102 8e-17 >seq3 Length=3165745 Score = 102 bits (112), Expect = 8e-17 Identities = 197/291 (68%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 129153 ATTTTTGAATCCAACAGCCATAGGTAATCCTGAAGCAATTTCACGATGGGTCTGTGATTC 129212 ||| ||||| || | |||| ||| ||||||| | ||||||||| || ||||| Sbjct 693539 ATTCTTGAAACCGATGCTCATACTTAAACCTGAAGATAATTCACGATGAACTTGAGATTC 693598 Query 129213 TGTAGTACGAGCACCAATAGCGACCCAACTAAAAATACCTGATAGATACTTAATAGTAAA 129272 ||| ||||||||||| || || ||||||| | | | | | ||| | | | | | Sbjct 693599 TGTCGTACGAGCACCTATTGCACCCCAACTGATCAAATCGGCAGTATATTGAGGACTGAT 693658 Query 129273 TGGGTCCAAGACCTCTGTCGCCAAAGGAAGTCCAAGATTCAATAGTTCTAAACAGAGATG 129332 || || |||| || || | ||| | || | | | ||| || | || Sbjct 693659 TGTATCTAAGAATTCCGTACCTGCAGGTAAACCCATTTCTGCGATTTCCAATAAAAGGCC 693718 Query 129333 GCGGGCAATTCTTAACCCTTCATCAATATTAAAAGAACCATTTAATTCTGGGTCGTTGAC 129392 || |||| |||||| |||| || ||| | |||||| ||||| | | ||| ||||| | Sbjct 693719 ACGAGCAAGTCTTAAACCTTTATTAATTTGAAAAGATCCATTAAGGTTTGGATCGTTAAT 693778 Query 129393 TAGGCCTTTCCAACCTACAGTTGTGCGTGGTTTTTCAAAATAAACCCGCAT 129443 || ||||||||||| || ||||| | ||||||||| |||||||| ||||| Sbjct 693779 TAAACCTTTCCAACCAACTGTTGTTCTTGGTTTTTCGAAATAAACACGCAT 693829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518236424278320