Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_031042.1 Length=111325 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 >seq4 Length=1961900 Score = 87.8 bits (96), Expect = 1e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 14677 GGCAAAGGACGTGGTTTACGTTTCATTTGCTCTTCTACTTGCTCCATATGATCACTATAA 14736 || || || | ||||| |||||||| ||| |||| | | || | |||||| |||||| Sbjct 1780113 GGGAACGGTCTTGGTTCACGTTTCAATTGTTCTTTGAGAGGTTCAACATGATCTCTATAA 1780172 Query 14737 ATATGCGTATCTCCCCCA-CTAAAGATAAGATAACGTGGTTTTAATCCAGTCAGTTTTGC 14795 | ||| | ||||||| ||||| || | ||||| || |||| |||| ||| || Sbjct 1780173 ACATGTGCATCTCCCATTGCTAAAACCAAT-TCACGTGCTTCACATCCTGTCACTTTGGC 1780231 Query 14796 CAGGATATGTGTTAATAAAGCATAACTAGCAATATTGAAAGGTAGGCCTA 14845 | |||||||| | |||||||||||| || |||||||| || | |||| Sbjct 1780232 GATCATATGTGTAAGTAAAGCATAACTTGCGATATTGAATGGGACTCCTA 1780281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356114948271068