Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4953 118 8e-22 >seq4953 Length=13799 Score = 118 bits (130), Expect = 8e-22 Identities = 205/292 (70%), Gaps = 6/292 (2%) Strand=Plus/Minus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 |||||||| |||| || | |||||||||||| | |||| || | | || || | Sbjct 7929 ACATAAAACTGACAAAACATATGACAAGGCGGAAGGGCCATCTTGGATAGATCAGATGGA 7870 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTT-ATAGTATCAATCAA 101985 |||||||||| | | ||||| | ||| ||||| ||||| ||| || | || || | Sbjct 7869 TTCCAAGCACTTAGGATCATCCGACGATCCGTAGG-TTTGTGTTTGATCTTCTCGATACA 7811 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATT-CT- 102043 | ||| ||||| || |||||||| || ||||||| | || || | || Sbjct 7810 ATCTTTCAATTGATCTACTCCTTCACCGGTATAATCAT--CTTTGGCCGTTCGGTAGCTC 7753 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || |||||||| | ||||||||||||||| | ||||| ||||||||||||||||| | | Sbjct 7752 GCACCGAAATGTCGCCACTGAAATCCATAGATCGGTCCTAGATCTCCTTCATCTCTATGA 7693 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGT 102155 || || | | |||| ||| | | | |||||||| ||| |||||||| Sbjct 7692 CCCAATCCGACACTTTCTAGAAAAGTTTTCGATCCATTTCCATTCCAAATGT 7641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361188579700973