Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq7247 96.9 4e-15 >seq7247 Length=24577 Score = 96.9 bits (106), Expect = 4e-15 Identities = 103/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| |||||||| | ||| |||||||||||||||||| ||||| || || || | Sbjct 7546 ACGCAATACCAAATGTAGGGTGGACTCCTTTTGAATATTGTAGTCAGCTAGCGTACGTCC 7605 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||| || || ||||| || || || || || || | || | | |||||| Sbjct 7606 GTCTTCCAGCTGTTTCCCGGCGAAAATAAGACGTTGTTGATCAGGTGGGATACCCTCCTT 7665 Query 43088 GTCCATGATTTTTTG 43102 |||| ||| |||||| Sbjct 7666 GTCC-TGAATTTTTG 7679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571715937978440