Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq11248 82.4 7e-11 >seq11248 Length=18918 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 14312 CCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCT 14371 || || || || |||||||||||||||||||| || ||||| ||||| ||||| | | | Sbjct 4867 CCAGAGAAAAAGATTCCCTCAACTGCAGCAAAAGCGATTAAGCGTTCCCCAAAGGTAGAT 4808 Query 14372 TTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 14431 |||| || ||||| || |||||| |||| ||||| || | || || Sbjct 4807 CGCTTGTCAGAAATCCAGTTCAGAGCCCAATCAGCCTTTTTACGGATGCAGGGGATGGTA 4748 Query 14432 TCAATAGCATTAAATAAATGT-TCCTTCTCT-TTAGTACTTGAAATGTATGTATCAATAA 14489 ||||| || | || | |||| ||||| ||| || || || | || ||| |||||||||| Sbjct 4747 TCAATGGCGTCGAAAAGATGTGTCCTT-TCTATTGGTTCTCG-AACGTAAGTATCAATAA 4690 Query 14490 GTAAGCTATACATTTCAGAGTGTATGTTTTCCATAG 14525 | | ||| | || || || ||||| ||| ||| Sbjct 4689 GGAGTGAATAGACCTCCGAATGGATGTTCTCCCTAG 4654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482259844981640