Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq7247 102 6e-17 >seq7247 Length=24577 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| | |||| |||||| || || || |||||||||||||| ||||| Sbjct 6959 CCACCACGCAGTCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGCA 7018 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| | ||| ||||||||||| || ||| |||| |||| ||||| || || Sbjct 7019 AGTGTTCGCCCATCCTCCAATTGTTTACCTGCAAAGATTAGTCGCTGTTGGTCTGGTGGG 7078 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||||||| ||| | |||||| | ||| || || | |||| | Sbjct 7079 ATGCCTTCCTTATCTTGAATCTTGGCCTTGACGTTGTCAATTGTATCCGATGACTCGACT 7138 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAA 18304 || | ||||||| | ||||| ||||| Sbjct 7139 TCGAGGGTGATGGTCTTGCCAGTCAA 7164 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || | || || || | ||||| |||||||| ||||| || ||||| || || Sbjct 7821 CCTCCACGCAATCGGAGCACAAGATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGCG 7880 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| || ||||||||||||||| || ||| |||| || | ||||||||| ||| Sbjct 7881 AGTGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATCAGACGTTGTTGATCTGGGGGA 7940 Query 18219 ACGCCTTCCTTATC 18232 | ||||||||| || Sbjct 7941 ATGCCTTCCTTGTC 7954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379278243444135