Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq7247 84.2 2e-11 >seq7247 Length=24577 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24856 ACCGGCAAAACGATAACCGTCGATGTCGAATCGAGCGACAGTGTAGAAACTGTTAAGGAA 24915 |||||||| || || ||| |||| || ||||| ||| | | || | ||| |||| Sbjct 8602 ACCGGCAAGACCATCACCCTCGAGGTTGAATCTTCCGATACCATTGACAATGTGAAGGCC 8543 Query 24916 AAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAGCAACGTTTAATATATGCGGGCAAA 24975 || ||| | |||||||| | || |||||||||||| | || | ||| || ||| Sbjct 8542 AAGATTCAAGATAAAGAAGGTATTCCACCAGACCAGCAACGTCTTATCTTTGCCGGAAAA 8483 Query 24976 CAACTGGAAGATTCCATGACTATGAACGATTACAGCATACAGAAAGAGGCCACGCTTCAT 25035 ||||| |||||| || || |||||||| ||| ||||| || |||| |||||| Sbjct 8482 CAACTCGAAGATGGACGTACCCTGGCCGATTACAACATCCAGAAGGAATCCACTCTTCAT 8423 Query 25036 TTAGTGTTACGATTGCGCGGAGGT 25059 || || | || |||| || ||| Sbjct 8422 TTGGTACTTCGTCTGCGTGGTGGT 8399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418231490008160