Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq11248 84.2 3e-11 >seq11248 Length=18918 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/161 (73%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 |||| || |||||||| | |||||| ||||||| || ||||| || |||||||||||| Sbjct 4378 AGGCTTCATTTTGGACAGCCGAAGAAATCGATCTTTCGAAGGATATGCACGATTGGGAGA 4437 Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTT--TGGCCTTCTTTGCCGG 125161 | |||| ||| |||| | | || |||| |||| | | || |||||||| | Sbjct 4438 ACAGATTGAATGATGATGAGAAACACTT--TATCAAACATGTCCTAGCTTTCTTTGCTGC 4495 Query 125162 CTCCGATGGAATCGTCAACGACAATCTG-TTGACACGATTC 125201 || |||||||| |||||||| || || |||| | ||||| Sbjct 4496 TTCGGATGGAATTGTCAACGAAAACTTGATTGA-AAGATTC 4535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740927448937480