Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq7247 86.0 5e-12 >seq7247 Length=24577 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 115310 ACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAA-GTAAAACA 115368 || || || ||||| ||| ||||| ||||| || || ||| |||| || || Sbjct 7161 ACTGGCAAGACCATCACCCTCGAAGTCGAGTCATCGGATACAATTG-ACAACGTCAAGGC 7103 Query 115369 AAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAA 115428 || ||| ||||| |||||| |||| || || || |||| || | ||| || || Sbjct 7102 CAAGATTCAAGATAAGGAAGGCATCCCACCAGACCAACAGCGACTAATCTTTGCAGGTAA 7043 Query 115429 ACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACA 115488 |||||| || |||| ||| | |||||||| ||||||||||| ||||||||| | || Sbjct 7042 ACAATTGGAGGATGGGCGAACACTTGCCGATTACAACATTCAAAAGGAGTCTACTCTTCA 6983 Query 115489 TATGGTGTTGAGATTGCGAGGAGG 115512 |||| ||| || |||| || || Sbjct 6982 CTTGGTCTTGCGACTGCGTGGTGG 6959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425270269674760