Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq11248 123 3e-23 >seq11248 Length=18918 Score = 123 bits (136), Expect = 3e-23 Identities = 162/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 ||| ||||| || ||||| |||| |||||| | || || ||| | ||||| || Sbjct 4586 AATCTGGAAGCCATAGAAGCATCGAGCTTCAGCCGCTTGAACCTCTCCACTGAATCTTTC 4527 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 | | ||||| ||||| || ||||| || || ||||| ||||| | | ||| || || Sbjct 4526 AATCAAGTTTTCGTTGACAATTCCATCCGAAGCAGCAAAGAAAGCTAGGACATGTTTGAT 4467 Query 93535 AAAATGTTTCTCATCATC-TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATC 93591 ||| |||||||||||||| || || | || ||||||||| | ||| || |||||||| Sbjct 4466 AAAGTGTTTCTCATCATCATTCAATCTGTTCTCCCAATCGTGCATATCCTTCGAAAGATC 4407 Query 93592 GACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 || ||||||| | |||||||| || || || ||| ||||| Sbjct 4406 GATTTCTTCGGCTGTCCAAAATGAAGCCTCGGCTCGCTTGTA 4365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556761797110520