Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq7247 87.8 2e-12 >seq7247 Length=24577 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 ||||| |||||| ||||| ||||||||| | || || | ||| || |||||||||||| Sbjct 7954 GACAAGGAAGGCATTCCCCCAGATCAACAACGTCTGATCTTTGCTGGGAAACAATTGGAA 7895 Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 ||| | || | || ||||| ||||| ||||| ||||| || || ||| | ||| | Sbjct 7894 GATGGTCGCACACTCGCTGATTACAATATCCAAAAGGAATCAACTCTTCATCTTGTGCTC 7835 Query 111400 CGTCTGCGCGGTGGCA 111415 || |||| || |||| Sbjct 7834 CGATTGCGTGGAGGCA 7819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422966669056600