Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5658 96.9 7e-15 >seq5658 Length=5767 Score = 96.9 bits (106), Expect = 7e-15 Identities = 157/225 (70%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 279691 TGCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTC 279750 ||||| | || || || || ||||||||||||||||| || || || | || ||||||| Sbjct 2497 TGCCA-TCGGATCACTCTCCGGTGGTTGGAAGATGAAACTTGCTCTTGCCCGGGCCATTC 2439 Query 279751 TACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACG 279810 | | |||||| || | ||||| |||||||| |||||||| |||| ||| | Sbjct 2438 TTTTCAAAGCCGATATCTTGCTGCTCGATGAGCCTACCAACCATTTGGATGTGCTCAATG 2379 Query 279811 TAGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTC 279870 | ||||| || |||| | | ||| ||| | | | || | || ||||||| Sbjct 2378 TTCAATGGCTCATGGACTACTTGAAGTCTCTTGAGACTTGTACCTCAATTATCGTCTCTC 2319 Query 279871 ACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACT 279915 |||||||||||||| | || ||| || | | ||||||||||| Sbjct 2318 ACGACTCTGGCTTCTTGGACAACGTTTGTACCGACATCATTCACT 2274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027649495051543