Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq7247 102 6e-17 >seq7247 Length=24577 Score = 102 bits (112), Expect = 6e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 |||||||| ||| | || | |||| || | ||||||||||| || |||||||| ||| Sbjct 8533 GATAAAGAAGGTATTCCACCAGACCAGCAACGTCTTATCTTTGCCGGAAAACAACTCGAA 8474 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| | || ||||||||||||| || ||||||||||| ||||||||| ||||| | Sbjct 8473 GATGGACGTACCCTGGCCGATTACAACATCCAGAAGGAATCCACTCTTCATTTGGTACTT 8414 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 8413 CGTCTGCGTGGTGG 8400 Score = 82.4 bits (90), Expect = 5e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| |||| |||||||| || |||||| | || ||| ||| | ||||||| Sbjct 7070 ACCAACAGCGACTAATCTTTGCAGGTAAACAATTGGAGGATGGGCGAACACTTGCCGATT 7011 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACG 22048 |||| ||||| ||||| ||||||||||| |||| || || Sbjct 7010 ACAACATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGCG 6971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358062721639942