Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq7247 87.8 1e-12 >seq7247 Length=24577 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || ||||| || || || | ||| | ||| ||| ||||| ||||| ||||| || Sbjct 7820 GCCTCCACGCAATCGGAGCACAAGATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGC 7879 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | ||| |||| |||||||||||||| |||| || | ||| || ||||| | ||| Sbjct 7880 GAGTGTGCGACCATCTTCCAATTGTTTCCCAGCAAAGATCAGACGTTGTTGATCTGGGGG 7939 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCA 39670 | |||||| ||||| ||||| || | ||| | | | ||||| | ||| | Sbjct 7940 AATGCCTTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCGATGGTGTCAGATGATTCAA 7998 Query 39671 CGTCCAAAGTAATTGTTTTACCCGT 39695 | |||| |||||||||||||| || Sbjct 7999 CCTCCAGCGTAATTGTTTTACCGGT 8023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347309385976559