Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq10229 129 7e-25 >seq10229 Length=16019 Score = 129 bits (142), Expect = 7e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 157933 GTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAG 157992 |||||||| || ||| ||||||||| ||||||||||||||| |||| || ||||| Sbjct 10546 GTTCTTGAAAACCCTGCTTGGTACACGAGTTACACTCCCTATCAGCCTGAAATCTCTCAA 10487 Query 157993 GGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCG 158052 || |||||||| |||| |||| ||||| ||| | |||| |||||||| |||| Sbjct 10486 GGCAGATTGGAGTCTTTGATCAACTACCAGACGATGATCAGCTCGCTCACAGGCTTACCT 10427 Query 158053 ATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || | || ||||| ||||||| ||||||||||| || || ||||| ||| Sbjct 10426 ATTTCTAATGCATCATTATTAGACGAAGCAACTGCTGCCGCTGAAGCCATG 10376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587946651847280