Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq11248 84.2 3e-11 >seq11248 Length=18918 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/200 (70%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 ||||| || ||||| || || | |||||||| |||||| || | || || | | Sbjct 4585 ATCTGGAAGCCATAGAAGCATCGAGCTTCAGCCGCTTGAACCTCTCCACTGAATCTTTCA 4526 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 |||||||| || || || ||||| ||| ||||||||||| || |||| ||| ||| Sbjct 4525 ATCAAGTTTTCGTTGACAATTCCATCCGAAGCAGCAAAGAAAGCTAGGACATGTTTGATA 4466 Query 37620 AAATGTCT---TTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCA 37676 || ||| | |||||||| || || | |||||| | ||||| || || | ||| Sbjct 4465 AAGTGTTTCTCATCATCATTCAATCTGTTCTCCCAATCGTGCATATCCTTCGAAAGATCG 4406 Query 37677 ACTTCATCAACGGTCCAAAA 37696 | ||| || | |||||||| Sbjct 4405 ATTTCTTCGGCTGTCCAAAA 4386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592211493476920